RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KPNA2P52292 529 aaKnown RBP14.46□□□□□ -0.1
CPSF7-201ENST00000340437 SEMA3BQ13214 749 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 C16orf72Q14CZ0 275 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 TMEM259Q4ZIN3 620 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 TIGD5Q53EQ6 642 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 CHSY3Q70JA7 882 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 NPLOC4Q8TAT6 608 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 NTAN1Q96AB6 310 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 VPS33AQ96AX1 596 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 SEMA4BQ9NPR2 832 aaPredicted RBP14.46□□□□□ -0.1
CPSF7-201ENST00000340437 FAM50BQ9Y247 325 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 COL1A2P08123 1366 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 J3KR12 359 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 PRSS56P0CW18 603 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 CDK4P11802 303 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 HSPA13P48723 471 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 RHDQ02161 417 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 PPIL2Q13356 520 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 DENND5AQ6IQ26 1287 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 FAM43BQ6ZT52 329 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 GPR142Q7Z601 462 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 LCA5Q86VQ0 697 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 CIR1Q86X95 450 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 MIB1Q86YT6 1006 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 PTGR2Q8N8N7 351 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 SHCBP1Q8NEM2 672 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 KCTD13Q8WZ19 329 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 MAF1Q9H063 256 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 IGSF5Q9NSI5 407 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 TMLHEQ9NVH6 421 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 MARCH4Q9P2E8 410 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 A0A0J9YYE9 177 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 TARM1B6A8C7 271 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 UBFD1O14562 309 aaKnown RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 ATP6V1B2P21281 511 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 ARCN1P48444 511 aaKnown RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 ARSDP51689 593 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 HPCAP84074 193 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 PRKCQQ04759 706 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 SQLEQ14534 574 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 MAPRE2Q15555 327 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 ZIK1Q3SY52 487 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 OTUD3Q5T2D3 398 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 NAT16Q8N8M0 369 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 SLCO4A1Q96BD0 722 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 SMARCD1Q96GM5 515 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 MAML3Q96JK9 1138 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 HBEGFQ99075 208 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 TBC1D30Q9Y2I9 924 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 VWA7Q9Y334 891 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 UBXN8O00124 270 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 GIPC1O14908 333 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 TFPTP0C1Z6 253 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 CDH2P19022 906 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-201ENST00000340437 APLP1P51693 650 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 CDKN2DP55273 166 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 FOXA1P55317 472 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 GRB7Q14451 532 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 HMBOX1Q6NT76 420 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 DCLRE1AQ6PJP8 1040 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 TLK2Q86UE8 772 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 MRGPRX2Q96LB1 330 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 TBATAQ96M53 351 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 SLC9A7Q96T83 725 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 AKTIPQ9H8T0 292 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 RGS18Q9NS28 235 aa14.45□□□□□ -0.1
CPSF7-201ENST00000340437 HTRA2O43464 458 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 H6PDO95479 791 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 NEDD8Q15843 81 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 TBC1D25Q3MII6 688 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 CASP10Q92851 521 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 FBXL20Q96IG2 436 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 C1orf50Q9BV19 199 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 SLC25A23Q9BV35 468 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 ZNF696Q9H7X3 374 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 PRDM16Q9HAZ2 1276 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 UTP6Q9NYH9 597 aaKnown RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 EBF1Q9UH73 591 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 CEPT1Q9Y6K0 416 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 MAFKO60675 156 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 RPL34P49207 117 aaKnown RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 SLC10A7Q0GE19 358 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 LRP8Q14114 963 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 RETREG3Q86VR2 466 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 SARS2Q9NP81 518 aaKnown RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 ABI2Q9NYB9 513 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 COMMD10Q9Y6G5 202 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 MYO7AQ13402 2215 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 PIP5K1BO14986 540 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 ESRRGP62508 458 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 POU4F1Q01851 419 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 CYP51A1Q16850 503 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 PLA2G4EQ3MJ16 856 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 SAMD4BQ5PRF9 694 aaKnown RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 MAGEE2Q8TD90 523 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 VPS50Q96JG6 964 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 CYP2S1Q96SQ9 504 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 ABHD16BQ9H3Z7 469 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 FAM124BQ9H5Z6 455 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-201ENST00000340437 SP110Q9HB58 689 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms