RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 BDNFP23560 247 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 PPATQ06203 517 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SUZ12Q15022 739 aaKnown RBP13.14□□□□□ -0.31
HLCS-201ENST00000336648 SPATA19Q7Z5L4 167 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SH3RF1Q7Z6J0 888 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 TTC7BQ86TV6 843 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SLC41A1Q8IVJ1 513 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 DSELQ8IZU8 1212 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 SMPD4Q9NXE4 827 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 FAM50BQ9Y247 325 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
HLCS-201ENST00000336648 F8VP50 259 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 H3BNH8 94 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 PDHXO00330 501 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 TSPAN4O14817 238 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ZNF806P0C7X5 589 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ANPEPP15144 967 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 FAM71AQ8IYT1 594 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 TBC1D21Q8IYX1 336 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ANKRD52Q8NB46 1076 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 BLOC1S4Q9NUP1 217 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 CARD8Q9Y2G2 431 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 PCDHGB3Q9Y5G1 929 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 KCNE2Q9Y6J6 123 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 KLRK1P26718 216 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 RPL22P35268 128 aaKnown RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 PSMD5Q16401 504 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 DOK6Q6PKX4 331 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 CXorf40BQ96DE9 158 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 AZIN1O14977 448 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 UGT2B11O75310 529 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 CD86P42081 329 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ALDH3A2P51648 485 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 SPESP1Q6UW49 350 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ZC3H7AQ8IWR0 971 aaKnown RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 LEMD2Q8NC56 503 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 FTHL17Q9BXU8 183 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ACE2Q9BYF1 805 aaPredicted RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 CRISPLD1Q9H336 500 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ATPIF1Q9UII2 106 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 SAMD4AQ9UPU9 718 aaKnown RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 MRPS33Q9Y291 106 aaKnown RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 DHRS12A0PJE2 317 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 ZNF432O94892 652 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 CHRNGP07510 517 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 GPD2P43304 727 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 RTP1P59025 263 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 TNFAIP8L3Q5GJ75 292 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 C1orf189Q5VU69 101 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 TUBA3EQ6PEY2 450 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 C1orf186Q6ZWK4 172 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 INTS7Q9NVH2 962 aaKnown RBP13.13□□□□□ -0.31
HLCS-201ENST00000336648 OR10H1Q9Y4A9 318 aa13.13□□□□□ -0.31
HLCS-201ENST00000336648 A0A0G2JPF8 293 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 HNRNPCL3B7ZW38 293 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 RECQL4O94761 1208 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 CST1P01037 141 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 S100A2P29034 98 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 SMARCB1Q12824 385 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 GALNT3Q14435 633 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 NRF1Q16656 503 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 BRMS1LQ5PSV4 323 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 ARHGAP36Q6ZRI8 547 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 OAFQ86UD1 273 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 MTMR9Q96QG7 549 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 OMDQ99983 421 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 AASDHPPTQ9NRN7 309 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 OR14I1A6ND48 311 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 PLK4O00444 970 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 PGRMC2O15173 223 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 OR10H2O60403 315 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 LRIG2O94898 1065 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 COL6A2P12110 1019 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 POU5F1Q01860 360 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 USF2Q15853 346 aaPredicted RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 GPAT3Q53EU6 434 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 BAP1Q92560 729 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 RTKNQ9BST9 563 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 SCAF8Q9UPN6 1271 aaKnown RBP13.12□□□□□ -0.31
HLCS-201ENST00000336648 N6AMT1Q9Y5N5 214 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 SUV39H1O43463 412 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 IFNA16P05015 189 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 AMD1P17707 334 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 ATF6P18850 670 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 EPORP19235 508 aa13.12□□□□□ -0.31
HLCS-201ENST00000336648 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms