RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 GOT2P00505 430 aaKnown RBP19.01■□□□□ 0.63
RFTN1-201ENST00000334133 ART3Q13508 389 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 CEACAM7Q14002 265 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 GRAMD1BQ3KR37 738 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 AGAP9Q5VTM2 703 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 LAYNQ6UX15 382 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 GIMAP2Q9UG22 337 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 PTGDR2Q9Y5Y4 395 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 UBFD1O14562 309 aaKnown RBP19■□□□□ 0.63
RFTN1-201ENST00000334133 SIX3O95343 332 aaPredicted RBP19■□□□□ 0.63
RFTN1-201ENST00000334133 RPLP2P05387 115 aaKnown RBP19■□□□□ 0.63
RFTN1-201ENST00000334133 TM4SF4P48230 202 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 SLC11A1P49279 550 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 NME5P56597 212 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 RPS24P62847 133 aaKnown RBP19■□□□□ 0.63
RFTN1-201ENST00000334133 SERINC3Q13530 473 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 PIWIL4Q7Z3Z4 852 aaKnown RBP19■□□□□ 0.63
RFTN1-201ENST00000334133 CUZD1Q86UP6 607 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 PTERQ96BW5 349 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 NACA2Q9H009 215 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 WDR41Q9HAD4 459 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 ZBTB26Q9HCK0 441 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 FBRSL1Q9HCM7 1045 aaKnown RBP19■□□□□ 0.63
RFTN1-201ENST00000334133 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19■□□□□ 0.63
RFTN1-201ENST00000334133 CCDC167Q9P0B6 97 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 H3BNX3 289 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 SLC6A4P31645 630 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 NRG1Q02297 640 aaPredicted RBP19■□□□□ 0.63
RFTN1-201ENST00000334133 CMPK2Q5EBM0 449 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 OR9I1Q8NGQ6 314 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 CALML6Q8TD86 181 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 NSMCE3Q96MG7 304 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 VPS45Q9NRW7 570 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 VTI1BQ9UEU0 232 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 AK5Q9Y6K8 562 aa19■□□□□ 0.63
RFTN1-201ENST00000334133 CCDC162PA2VCL2 907 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 TXNDC9O14530 226 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 PRDX6P30041 224 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 RGRP47804 291 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 ZNF549Q6P9A3 640 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 BNC2Q6ZN30 1099 aaPredicted RBP18.99■□□□□ 0.63
RFTN1-201ENST00000334133 LRRC49Q8IUZ0 686 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 RP9Q8TA86 221 aaKnown RBP18.99■□□□□ 0.63
RFTN1-201ENST00000334133 TRPC7Q9HCX4 862 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 GREB1Q4ZG55 1949 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 CCDC189A1A4V9 331 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 CLCN5P51795 746 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 PFKPQ01813 784 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 FLOT2Q14254 428 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 KLC3Q6P597 504 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 AAGABQ6PD74 315 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 CCDC117Q8IWD4 279 aaPredicted RBP18.99■□□□□ 0.63
RFTN1-201ENST00000334133 SLC45A3Q96JT2 553 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 ZNF385DQ9H6B1 395 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 STARD7Q9NQZ5 370 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 MARCH5Q9NX47 278 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 PCDH10Q9P2E7 1040 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 IGLV3-10A0A075B6K4 115 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 UBA6A0AVT1 1052 aaPredicted RBP18.99■□□□□ 0.63
RFTN1-201ENST00000334133 TCAF2A6NFQ2 919 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 MROH6A6NGR9 719 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 C9JVG2 144 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 LIN7AO14910 233 aaPredicted RBP18.99■□□□□ 0.63
RFTN1-201ENST00000334133 RNASEH1O60930 286 aaKnown RBP18.99■□□□□ 0.63
RFTN1-201ENST00000334133 GJB5O95377 273 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 TACR2P21452 398 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 PRKAA2P54646 552 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 KIAA0408Q6ZU52 694 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 ARHGAP18Q8N392 663 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 SPPL2BQ8TCT7 592 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 CNDP1Q96KN2 507 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 TUBGCP5Q96RT8 1024 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 ADA2Q9NZK5 511 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 SCOCQ9UIL1 159 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 FAM50BQ9Y247 325 aa18.99■□□□□ 0.63
RFTN1-201ENST00000334133 NBNO60934 754 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 ALDH2P05091 517 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 CST5P28325 142 aaPredicted RBP18.98■□□□□ 0.63
RFTN1-201ENST00000334133 SCNN1BP51168 640 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 NKX3-2P78367 333 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 ISCA2Q86U28 154 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 KBTBD6Q86V97 674 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 NAT14Q8WUY8 206 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 POLR1EQ9GZS1 481 aaKnown RBP18.98■□□□□ 0.63
RFTN1-201ENST00000334133 GKN1Q9NS71 199 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 NPHS1O60500 1241 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 TSPAN3O60637 253 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 FAM189BP81408 668 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 TCTN1Q2MV58 587 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 TEX26Q8N6G2 289 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 BHLHE22Q8NFJ8 381 aaPredicted RBP18.98■□□□□ 0.63
RFTN1-201ENST00000334133 CEP70Q8NHQ1 597 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 HMGCLL1Q8TB92 370 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 BCL7CQ8WUZ0 217 aaPredicted RBP18.98■□□□□ 0.63
RFTN1-201ENST00000334133 GATA6Q92908 595 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 UBXN10Q96LJ8 280 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 PPP1R2P1Q96PQ5 205 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 PCDHB7Q9Y5E2 793 aa18.98■□□□□ 0.63
RFTN1-201ENST00000334133 ZFP37Q9Y6Q3 630 aaPredicted RBP18.98■□□□□ 0.63
RFTN1-201ENST00000334133 FNDC1Q4ZHG4 1894 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms