RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 NUMBLQ9Y6R0 609 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 NHSL1Q5SYE7 1610 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 S100A5P33763 92 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 RGS4P49798 205 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 VAC14Q08AM6 782 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 ILF2Q12905 390 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 TSTA3Q13630 321 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 TIGD2Q4W5G0 525 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 C10orf120Q5SQS8 335 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 CRYBG2Q8N1P7 616 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 RORBQ92753 470 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 CASP10Q92851 521 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PPP1R14BQ96C90 147 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PGLYRP2Q96PD5 576 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 GAD1Q99259 594 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 FTHL17Q9BXU8 183 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 YJEFN3A6XGL0 299 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PDLIM1O00151 329 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 SERPINF2P08697 491 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PSMB9P28065 219 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 RPS9P46781 194 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 CCR3P51677 355 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 EFEMP1Q12805 493 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 CBX3Q13185 183 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM187BQ17R55 369 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 ZNF423Q2M1K9 1284 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PIGGQ5H8A4 983 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 FBXO30Q8TB52 745 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 SH3GL1Q99961 368 aa12.79□□□□□ -0.36
DNMT3A-202ENST00000321117 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 GPIP06744 558 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 TKTP29401 623 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 NEK2P51955 445 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 POLD3Q15054 466 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 ZBED5Q49AG3 693 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 CACHD1Q5VU97 1274 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 EID3Q8N140 333 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 DDX28Q9NUL7 540 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 IGKV6D-21A0A0A0MT36 114 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 C17orf102A2RUQ5 167 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 EVPLLA8MZ36 301 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 RAMP2O60895 175 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 FMO4P31512 558 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 MERTKQ12866 999 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 PRKG2Q13237 762 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 ACAP2Q15057 778 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 MAPK11Q15759 364 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 PERM1Q5SV97 790 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 CNSTQ6PJW8 725 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 LDB1Q86U70 411 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 HORMAD1Q86X24 394 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 OR9I1Q8NGQ6 314 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 TEPSINQ96N21 525 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 HPS4Q9NQG7 708 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 SMCHD1A6NHR9 2005 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 ZBTB11O95625 1053 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 COL1A2P08123 1366 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 DAOAP59103 153 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 TUBA4AP68366 448 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 TWF1Q12792 350 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 EPS8Q12929 822 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 RFTN1Q14699 578 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 FOXB2Q5VYV0 432 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM43BQ6ZT52 329 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 BPIFB6Q8NFQ5 453 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 TWIST2Q8WVJ9 160 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 FCRL2Q96LA5 508 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 HAPLN3Q96S86 360 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 TMEM165Q9HC07 324 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 CATSPERZQ9NTU4 200 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 PADI4Q9UM07 663 aa12.78□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC2A4P14672 509 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 CYP3A5P20815 502 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 CCNCP24863 283 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 MS4A2Q01362 244 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 OVOS1Q6IE37 1185 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 DCP1BQ8IZD4 617 aaKnown RBP12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 NTAN1Q96AB6 310 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM120BQ96EK7 910 aaKnown RBP12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 SERPINB11Q96P15 392 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 CINPQ9BW66 212 aaPredicted RBP12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 ABCC13Q9NSE7 274 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 PHF24Q9UPV7 400 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 PTCH2Q9Y6C5 1203 aa12.77□□□□□ -0.36
DNMT3A-202ENST00000321117 AQP12BA6NM10 295 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 BNIP3LO60238 219 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 KRT8P05787 483 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 PGGT1BP53609 377 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 LILRA4P59901 499 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 ITGA7Q13683 1181 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 UGT3A1Q6NUS8 523 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 FBXL19Q6PCT2 694 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 AQP12AQ8IXF9 295 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms