RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ADRB3P13945 408 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 XPAP23025 273 aaPredicted RBP20.82■□□□□ 0.92
RTCA-201ENST00000260563 SARNPP82979 210 aaKnown RBP20.82■□□□□ 0.92
RTCA-201ENST00000260563 IHHQ14623 411 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 PCSK7Q16549 785 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 MAP7D1Q3KQU3 841 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 PIP5KL1Q5T9C9 394 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 EMBQ6PCB8 327 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 HNRNPLLQ8WVV9 542 aaKnown RBP20.82■□□□□ 0.92
RTCA-201ENST00000260563 NELL1Q92832 810 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 FAM131CQ96AQ9 280 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 TADA1Q96BN2 335 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 PWWP2AQ96N64 755 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 FRMD8Q9BZ67 464 aaPredicted RBP20.82■□□□□ 0.92
RTCA-201ENST00000260563 BTBD1Q9H0C5 482 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 PCDHB9Q9Y5E1 797 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 THADAQ6YHU6 1953 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 USP34Q70CQ2 3546 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 IGHV1OR15-9A0A0B4J2B8 117 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 PMPCBO75439 489 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 PGLSO95336 258 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 CD6P30203 668 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 TNNT3P45378 269 aaPredicted RBP20.81■□□□□ 0.92
RTCA-201ENST00000260563 POLR2LP62875 67 aaKnown RBP20.81■□□□□ 0.92
RTCA-201ENST00000260563 SPARCL1Q14515 664 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 FBXO38Q6PIJ6 1188 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 ZSWIM9Q86XI8 627 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 IPMKQ8NFU5 416 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 IFT43Q96FT9 208 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 SERPINB12Q96P63 405 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 FSD1LQ9BXM9 530 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 TSPYL1Q9H0U9 437 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 SGK2Q9HBY8 427 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 CHKBQ9Y259 395 aa20.81■□□□□ 0.92
RTCA-201ENST00000260563 UPK3BL1B0FP48 263 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 UPK3BL2E5RIL1 263 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 FZD6O60353 706 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 PPFIA2O75334 1257 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 ADPRHP54922 357 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 ARL4CP56559 192 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 UGP2Q16851 508 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 KDELC1Q6UW63 502 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 ZNF534Q76KX8 674 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 FAM160A2Q8N612 972 aaPredicted RBP20.8■□□□□ 0.92
RTCA-201ENST00000260563 OR14C36Q8NHC7 312 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 SPOCK2Q92563 424 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 RAB7BQ96AH8 199 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 TOE1Q96GM8 510 aaKnown RBP20.8■□□□□ 0.92
RTCA-201ENST00000260563 MRGPRX2Q96LB1 330 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 INVSQ9Y283 1065 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 PCDHGA2Q9Y5H1 932 aa20.8■□□□□ 0.92
RTCA-201ENST00000260563 PLRG1O43660 514 aaKnown RBP20.79■□□□□ 0.92
RTCA-201ENST00000260563 RPP40O75818 363 aaKnown RBP20.79■□□□□ 0.92
RTCA-201ENST00000260563 NFKBIAP25963 317 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 GRIA1P42261 906 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 ABL2P42684 1182 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 SUOXP51687 545 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 EPHB1P54762 984 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 WNT3AP56704 352 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 CDK18Q07002 472 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 HIF1AQ16665 826 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 LRRC73Q5JTD7 316 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 FNBP1LQ5T0N5 605 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 NAPEPLDQ6IQ20 393 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 LRRC8BQ6P9F7 803 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 CEP128Q6ZU80 1094 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 CENPUQ71F23 418 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 LINC00523Q86TU6 105 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 TTC7BQ86TV6 843 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 CAND1Q86VP6 1230 aaKnown RBP20.79■□□□□ 0.92
RTCA-201ENST00000260563 CCDC25Q86WR0 208 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 PDIK1LQ8N165 341 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 FRMD1Q8N878 549 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 ZBTB44Q8NCP5 570 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 LPCAT1Q8NF37 534 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 GAB3Q8WWW8 586 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 ANKRD7Q92527 254 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 CAVIN3Q969G5 261 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 TBL1YQ9BQ87 522 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 XAB2Q9HCS7 855 aaKnown RBP20.79■□□□□ 0.92
RTCA-201ENST00000260563 WSB2Q9NYS7 404 aaPredicted RBP20.79■□□□□ 0.92
RTCA-201ENST00000260563 PHTF1Q9UMS5 762 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 ARIH1Q9Y4X5 557 aaPredicted RBP20.79■□□□□ 0.92
RTCA-201ENST00000260563 MYLKQ15746 1914 aa20.79■□□□□ 0.92
RTCA-201ENST00000260563 NDUFS2O75306 463 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 USP12O75317 370 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 PDHA1P08559 390 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 MLNP12872 115 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 TIMP2P16035 220 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 ACSL1P33121 698 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 CNR2P34972 360 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 ADRA1AP35348 466 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 OLIG2Q13516 323 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 ERAP2Q6P179 960 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 SLC36A4Q6YBV0 504 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 KDELC2Q7Z4H8 507 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 C11orf74Q86VG3 221 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 NDUFAF2Q8N183 169 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 PRSS33Q8NF86 280 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 FEM1CQ96JP0 617 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms