RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MFN1Q8IWA4 741 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 CFAP52Q8N1V2 620 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 MPP5Q8N3R9 675 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 DCLK2Q8N568 766 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 NETO2Q8NC67 525 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 USP33Q8TEY7 942 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 ISG20Q96AZ6 181 aaKnown RBP13.3□□□□□ -0.28
SLIRP-201ENST00000238688 ZNF669Q96BR6 464 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-201ENST00000238688 IFT43Q96FT9 208 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 MSANTD3Q96H12 275 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 ZNF419Q96HQ0 510 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-201ENST00000238688 APOPT1Q96IL0 206 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 CYP2S1Q96SQ9 504 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 SEMA3CQ99985 751 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 ADGRE3Q9BY15 652 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 ZSCAN32Q9NX65 697 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 HACD3Q9P035 362 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 CTNNAL1Q9UBT7 734 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 PCDHGA2Q9Y5H1 932 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 OR51B4Q9Y5P0 310 aa13.3□□□□□ -0.28
SLIRP-201ENST00000238688 CACNA1AO00555 2505 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 A0A0D9SEW6 157 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 A0A1W2PQ67 120 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 GMNCA6NCL1 334 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 INSIG1O15503 277 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 PMPCBO75439 489 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 MT-CYBP00156 380 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-201ENST00000238688 PENKP01210 267 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-201ENST00000238688 MMP2P08253 660 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 KRT4P19013 534 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 PSMA3P25788 255 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 CD86P42081 329 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 CCT5P48643 541 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 ZXDBP98169 803 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 SATB1Q01826 763 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 GUCY1A3Q02108 690 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 PON2Q15165 354 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 INSCQ1MX18 579 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 RASSF3Q86WH2 238 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 TRIM42Q8IWZ5 723 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 BANPQ8N9N5 519 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 OR7D4Q8NG98 312 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 SPATA22Q8NHS9 363 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 SH3RF2Q8TEC5 729 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 DDI1Q8WTU0 396 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 DYDC1Q8WWB3 177 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 MAGEB18Q96M61 343 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 IER2Q9BTL4 223 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 SPON2Q9BUD6 331 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
SLIRP-201ENST00000238688 KCNK9Q9NPC2 374 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 TREX1Q9NSU2 369 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 VPS28Q9UK41 221 aa13.29□□□□□ -0.28
SLIRP-201ENST00000238688 CORO1CQ9ULV4 474 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-201ENST00000238688 MROH6A6NGR9 719 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 K7ESF4 209 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 SLC7A4O43246 635 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 CRTAMO95727 393 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 GSTA1P08263 222 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 ARSAP15289 507 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 ACVR1Q04771 509 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 DMWDQ09019 674 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 RUNX3Q13761 415 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 ZNF77Q15935 545 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 SEPT7Q16181 437 aaKnown RBP13.28□□□□□ -0.28
SLIRP-201ENST00000238688 SKIDA1Q1XH10 827 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 NAIF1Q69YI7 327 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-201ENST00000238688 PACS1Q6VY07 963 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 KCNMB4Q86W47 210 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 CARNMT1Q8N4J0 409 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLIRP-201ENST00000238688 RAB3IL1Q8TBN0 382 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 BRSK1Q8TDC3 778 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 GRAMD1AQ96CP6 724 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 MYEOVQ96EZ4 313 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 ALG14Q96F25 216 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 CHMP6Q96FZ7 201 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 PLCD4Q9BRC7 762 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 CEP44Q9C0F1 390 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 VPS11Q9H270 941 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 EBF3Q9H4W6 596 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 FBRSL1Q9HCM7 1045 aaKnown RBP13.28□□□□□ -0.28
SLIRP-201ENST00000238688 SCUBE2Q9NQ36 999 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
SLIRP-201ENST00000238688 ABCB8Q9NUT2 735 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 MYLKQ15746 1914 aa13.28□□□□□ -0.28
SLIRP-201ENST00000238688 TRIM49D1C9J1S8 452 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 CBX4O00257 560 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 ATP9BO43861 1147 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 SOCS5O75159 536 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 USP12O75317 370 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 ASMTLO95671 621 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 SERPINB8P50452 374 aa13.27□□□□□ -0.29
SLIRP-201ENST00000238688 LIMK2P53671 638 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms