RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 HMGCLL1Q8TB92 370 aa14.29□□□□□ -0.12
SHPK-201ENST00000225519 PNPT1Q8TCS8 783 aaKnown RBP14.29□□□□□ -0.12
SHPK-201ENST00000225519 ZUFSPQ96AP4 578 aa14.29□□□□□ -0.12
SHPK-201ENST00000225519 DUS3LQ96G46 650 aaKnown RBP14.29□□□□□ -0.12
SHPK-201ENST00000225519 MAELQ96JY0 434 aaKnown RBP14.29□□□□□ -0.12
SHPK-201ENST00000225519 RNF145Q96MT1 663 aa14.29□□□□□ -0.12
SHPK-201ENST00000225519 ZNF347Q96SE7 839 aa14.29□□□□□ -0.12
SHPK-201ENST00000225519 SCN9AQ15858 1988 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 C16orf96A6NNT2 1141 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 ARPC2O15144 300 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 TPI1P60174 286 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 CDH17Q12864 832 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 DALRD3Q5D0E6 543 aaKnown RBP14.28□□□□□ -0.12
SHPK-201ENST00000225519 MFSD4BQ5TF39 518 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 NAPEPLDQ6IQ20 393 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 RYBPQ8N488 228 aaPredicted RBP14.28□□□□□ -0.12
SHPK-201ENST00000225519 ROPN1LQ96C74 230 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 MUS81Q96NY9 551 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 TUBA1CQ9BQE3 449 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 CASS4Q9NQ75 786 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 DSEQ9UL01 958 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 RSL1D1O76021 490 aaKnown RBP14.28□□□□□ -0.12
SHPK-201ENST00000225519 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 KIAA1217Q5T5P2 1943 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 FAM219BQ5XKK7 198 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 PRMT9Q6P2P2 845 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 SPNS2Q8IVW8 549 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 OR13F1Q8NGS4 319 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 SLC35F5Q8WV83 523 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 MAGED4Q96JG8 741 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 PCYT2Q99447 389 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 HOPXQ9BPY8 73 aaPredicted RBP14.28□□□□□ -0.12
SHPK-201ENST00000225519 KCTD14Q9BQ13 255 aaPredicted RBP14.28□□□□□ -0.12
SHPK-201ENST00000225519 SLX1AQ9BQ83 275 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 LHPPQ9H008 270 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 VRTNQ9H8Y1 702 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 NANOGQ9H9S0 305 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 B3GNT3Q9Y2A9 372 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 IQCA1LA6NCM1 817 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 DEAF1O75398 565 aaPredicted RBP14.28□□□□□ -0.12
SHPK-201ENST00000225519 MYO1DO94832 1006 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 YBX3P16989 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHPK-201ENST00000225519 CHRM3P20309 590 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 SERPINB1P30740 379 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 HMGCS2P54868 508 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 KCNJ8Q15842 424 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 ZNF470Q6ECI4 717 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 SLCO6A1Q86UG4 719 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 TMEM151AQ8N4L1 468 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 IPMKQ8NFU5 416 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 SDCCAG3Q96C92 435 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 MINDY3Q9H8M7 445 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 FZD10Q9ULW2 581 aa14.28□□□□□ -0.12
SHPK-201ENST00000225519 CRCPO75575 148 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 S100BP04271 92 aaPredicted RBP14.27□□□□□ -0.12
SHPK-201ENST00000225519 MBL2P11226 248 aaPredicted RBP14.27□□□□□ -0.12
SHPK-201ENST00000225519 ERCC2P18074 760 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 IDUAP35475 653 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 HPCAL1P37235 193 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 CCT8P50990 548 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 GJA9P57773 515 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 ATP6V0D1P61421 351 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 LSM3P62310 102 aaKnown RBP14.27□□□□□ -0.12
SHPK-201ENST00000225519 NFYCQ13952 458 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 PSMD5Q16401 504 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 EFCAB12Q6NXP0 572 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 BTLAQ7Z6A9 289 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 STK32CQ86UX6 486 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 CADM3Q8N126 398 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 FEM1CQ96JP0 617 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 ALPK1Q96QP1 1244 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 OSBPL2Q9H1P3 480 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 PIM2Q9P1W9 311 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 GIMAP2Q9UG22 337 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 SARDHQ9UL12 918 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 TNFSF13BQ9Y275 285 aa14.27□□□□□ -0.12
SHPK-201ENST00000225519 GOLGB1Q14789 3259 aaKnown RBP14.27□□□□□ -0.12
SHPK-201ENST00000225519 HUS1O60921 280 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 CYP2C8P10632 490 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 CYP2C9P11712 490 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 POLR2IP36954 125 aaKnown RBP14.27□□□□□ -0.13
SHPK-201ENST00000225519 GRM5P41594 1212 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 GSSP48637 474 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 INCA1Q0VD86 236 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 CYBRD1Q53TN4 286 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 TSTD2Q5T7W7 516 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 AGAP9Q5VTM2 703 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 ADCK1Q86TW2 530 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 RETREG3Q86VR2 466 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 GABPB2Q8TAK5 448 aaPredicted RBP14.27□□□□□ -0.13
SHPK-201ENST00000225519 YTHDF1Q9BYJ9 559 aaKnown RBP14.27□□□□□ -0.13
SHPK-201ENST00000225519 WDR12Q9GZL7 423 aaKnown RBP14.27□□□□□ -0.13
SHPK-201ENST00000225519 BAG5Q9UL15 447 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 COL2A1P02458 1487 aaPredicted RBP14.27□□□□□ -0.13
SHPK-201ENST00000225519 AHDC1Q5TGY3 1603 aaPredicted RBP14.27□□□□□ -0.13
SHPK-201ENST00000225519 PTGES3LE9PB15 166 aa14.27□□□□□ -0.13
SHPK-201ENST00000225519 IPO13O94829 963 aaKnown RBP14.27□□□□□ -0.13
SHPK-201ENST00000225519 ALOX5P09917 674 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms