RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 COX7A2P14406 83 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 HALP42357 657 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 RAB2AP61019 212 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 VBP1P61758 197 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 NOMO3P69849 1222 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ACSM2AQ08AH3 577 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ACSM2BQ68CK6 577 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 HGSNATQ68CP4 663 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 CERS6Q6ZMG9 384 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 THAP5Q7Z6K1 395 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 FAM131BQ86XD5 332 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 LRRN4CLQ8ND94 238 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SLC9A7Q96T83 725 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ACOX2Q99424 681 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SEZ6LQ9BYH1 1024 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 CYP4F12Q9HCS2 524 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 GPRC5CQ9NQ84 441 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TRPV5Q9NQA5 729 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ZSCAN32Q9NX65 697 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 COMMD9Q9P000 198 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 PLA2G4CQ9UP65 541 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 WDR37Q9Y2I8 494 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 FAM92AA1XBS5 289 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SPATA31C2B4DYI2 1134 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 H3BRB1 525 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 BTN3A3O00478 584 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 CCNT2O60583 730 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 ITGA10O75578 1167 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 IFNGP01579 166 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TFRCP02786 760 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 CATP04040 527 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 ASLP04424 464 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 FYNP06241 537 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 CAPN1P07384 714 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 UROSP10746 265 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 YBX3P16989 372 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHD9-201ENST00000219084 SLC16A1P53985 500 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 PKNOX1P55347 436 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ACTR3P61158 418 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ATP13A4Q4VNC1 1196 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 PDCD4Q53EL6 469 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 ZC3H12AQ5D1E8 599 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 TUBA3EQ6PEY2 450 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TMPRSS11AQ6ZMR5 421 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 LRRC71Q8N4P6 559 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TPD52L3Q96J77 140 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SLC4A5Q9BY07 1137 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TUT1Q9H6E5 874 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 NOL11Q9H8H0 719 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 ELP3Q9H9T3 547 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 LRRC4CQ9HCJ2 640 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 CHST7Q9NS84 486 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SUCOQ9UBS9 1254 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 POLLQ9UGP5 575 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 PCDHB12Q9Y5F1 795 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 V9GYQ6 96 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SNAP23O00161 211 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 FAM163BP0C2L3 166 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 DARSP14868 501 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 PPATQ06203 517 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SCN1BQ07699 218 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 BMPR2Q13873 1038 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 MYBPC3Q14896 1274 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ZNF57Q68EA5 555 aaPredicted RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 TYW3Q6IPR3 259 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 DENND5AQ6IQ26 1287 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 USP43Q70EL4 1123 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 MTSS1LQ765P7 747 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ERI1Q8IV48 349 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 LNX1Q8TBB1 728 aaPredicted RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 TEX47Q8TBZ9 253 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SPPL2AQ8TCT8 520 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 MAGEE2Q8TD90 523 aaPredicted RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 GLT1D1Q96MS3 346 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 RDH12Q96NR8 316 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TUBGCP5Q96RT8 1024 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 CHID1Q9BWS9 393 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 RNPEPQ9H4A4 650 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 MRM3Q9HC36 420 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 MRPL39Q9NYK5 338 aaKnown RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 MKLN1Q9UL63 735 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 RGS10O43665 173 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 FAM189A1O60320 539 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 MSCO60682 206 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 AP2A1O95782 977 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 CST1P01037 141 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SLC6A2P23975 617 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 PSMB4P28070 264 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 ACADLP28330 430 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 MPP1Q00013 466 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 MVKQ03426 396 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 BCL2L1Q07817 233 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 EFEMP1Q12805 493 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 PFKFB4Q16877 469 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 RUNDC3AQ59EK9 446 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 DGKKQ5KSL6 1271 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 OTUD3Q5T2D3 398 aaPredicted RBP4.43□□□□□ -1.7
CHD9-201ENST00000219084 NANOGNBQ7Z5D8 188 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SYT12Q8IV01 421 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms