RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 DHFR2Q86XF0 187 aa11.13□□□□□ -0.63
RGPD5-201ENST00000016946 ACTRT2Q8TDY3 377 aa11.13□□□□□ -0.63
RGPD5-201ENST00000016946 MRPL48Q96GC5 212 aaKnown RBP11.13□□□□□ -0.63
RGPD5-201ENST00000016946 USE1Q9NZ43 259 aa11.13□□□□□ -0.63
RGPD5-201ENST00000016946 DNM1LO00429 736 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 VHLP40337 213 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 IRX1P78414 480 aaPredicted RBP11.12□□□□□ -0.63
RGPD5-201ENST00000016946 PDGFRLQ15198 375 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 CPSF6Q16630 551 aaKnown RBP eCLIP11.12□□□□□ -0.63
RGPD5-201ENST00000016946 RHBDF2Q6PJF5 856 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 CYP4Z2PQ8N1L4 340 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 PIWIL2Q8TC59 973 aaKnown RBP11.12□□□□□ -0.63
RGPD5-201ENST00000016946 KCTD5Q9NXV2 234 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 SNED1Q8TER0 1413 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 AVILO75366 819 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 WDR47O94967 919 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 TCF3P15923 654 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 FSHRP23945 695 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 RXRGP48443 463 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 TEAD4Q15561 434 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 DUPD1Q68J44 220 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 TMPRSS6Q8IU80 811 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 ACTL7BQ9Y614 415 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 DCXO43602 365 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 ERAL1O75616 437 aaKnown RBP11.12□□□□□ -0.63
RGPD5-201ENST00000016946 TOMM20Q15388 145 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 TAF5Q15542 800 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 SNAP47Q5SQN1 464 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 FNBP1LQ5T0N5 605 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 UBE2R2Q712K3 238 aaPredicted RBP11.12□□□□□ -0.63
RGPD5-201ENST00000016946 PARGQ86W56 976 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 TMEM192Q8IY95 271 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 TRIB2Q92519 343 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 RHOJQ9H4E5 214 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 CICQ96RK0 1608 aaPredicted RBP11.12□□□□□ -0.63
RGPD5-201ENST00000016946 CCDC189A1A4V9 331 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 MATN3O15232 486 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 INTS11Q5TA45 600 aaKnown RBP11.12□□□□□ -0.63
RGPD5-201ENST00000016946 HGSNATQ68CP4 663 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 SCAMP5Q8TAC9 235 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 BCAS3Q9H6U6 928 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 POLR1DQ9Y2S0 133 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 SIGLEC1Q9BZZ2 1709 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 OR6A2O95222 327 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 NTRK1P04629 796 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 IL10RBQ08334 325 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 GSTA3Q16772 222 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 VITQ6UXI7 678 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 IL12RB2Q99665 862 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 MYOM1P52179 1685 aa11.12□□□□□ -0.63
RGPD5-201ENST00000016946 NOL4O94818 638 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TPSB2P20231 275 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 CACNG1Q06432 222 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TPSAB1Q15661 275 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 LDLRAD1Q5T700 205 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 VN1R5Q7Z5H4 357 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 GPR156Q8NFN8 814 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 RDH11Q8TC12 318 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 SLC22A17Q8WUG5 538 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 QKIQ96PU8 341 aaKnown RBP eCLIP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 NMUR1Q9HB89 426 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TLR9Q9NR96 1032 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 LIMD1Q9UGP4 676 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 KLHL20Q9Y2M5 609 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TCRBV9S1A1TA0A576 114 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 UMPSP11172 480 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 KLC1Q07866 573 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 RCN1Q15293 331 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 USP39Q53GS9 565 aaKnown RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 ZBTB49Q6ZSB9 765 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 CLEC20AQ6ZU45 233 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TAF8Q7Z7C8 310 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 CRYBG2Q8N1P7 616 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TSTD1Q8NFU3 115 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 PTCD2Q8WV60 388 aaKnown RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 PIPSLA2A3N6 862 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 INSIG1O15503 277 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 DEAF1O75398 565 aaPredicted RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 NQO1P15559 274 aaKnown RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 SLC11A1P49279 550 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 CLK3P49761 638 aaKnown RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 RPL10LQ96L21 214 aaKnown RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 SNX15Q9NRS6 342 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 INTS7Q9NVH2 962 aaKnown RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TMEM216Q9P0N5 145 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 FASP25445 335 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 SERPINB3P29508 390 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 ZNF786Q8N393 782 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 DPP10Q8N608 796 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 POU5F2Q8N7G0 328 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 PRCCQ92733 491 aaPredicted RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 TRMT61BQ9BVS5 477 aaKnown RBP11.11□□□□□ -0.63
RGPD5-201ENST00000016946 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
RGPD5-201ENST00000016946 INVSQ9Y283 1065 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms