RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Atp6v1hQ8BVE3 483 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ccdc90bQ8C3X2 256 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cog4Q8R1U1 785 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Olfr1325Q8VF43 315 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Slc15a4Q91W98 574 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Fam49bQ921M7 324 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cdyl2Q9D5D8 503 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Chit1Q9D7Q1 464 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mmp19Q9JHI0 527 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rgs17Q9QZB0 210 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Copg1Q9QZE5 874 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mapk11Q9WUI1 364 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Btbd35f21A0A140T8Q5 498 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zscan4eA0A1B0GRE8 505 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Btbd35f22J3QN64 498 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 PfkmP47857 780 aaKnown RBP8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 CcnfP51944 777 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Trappc9Q3U0M1 1148 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Snx21Q3UR97 363 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Garem2Q6PAJ3 880 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Nacc1Q7TSZ8 514 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Polr2eQ80UW8 210 aaKnown RBP8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Disc1Q811T9 852 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mfsd6Q8CBH5 775 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mrpl47Q8K2Y7 252 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tbc1d13Q8R3D1 400 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Chchd6Q91VN4 273 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pex6Q99LC9 981 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 MydgfQ9CPT4 166 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ssxb1Q9CPU1 170 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Upk1aQ9D132 257 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ttc25Q9D4B2 624 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Hcar2Q9EP66 360 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Atp13a1Q9EPE9 1200 aaKnown RBP8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Fiz1Q9WTJ4 500 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Smarcb1Q9Z0H3 385 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mageb2A2AHM0 380 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 F830016B08RikG3UWE2 416 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm6351K9J7D1 481 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Krt1P04104 637 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Il12bP43432 335 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Lrpap1P55302 360 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 E2f2P56931 443 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Vps45P97390 570 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Echdc2Q3TLP5 296 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gpr65Q61038 337 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Abcd2Q61285 741 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Bcap29Q61334 240 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cbx5Q61686 191 aaKnown RBP8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Itga2Q62469 1178 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pdk1Q8BFP9 434 aaKnown RBP8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Aste1Q8BIR2 672 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Hspbap1Q8BK58 483 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Aifm2Q8BUE4 373 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Slco6c1Q8C0X7 706 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Znf467Q8JZL0 594 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Stx5Q8K1E0 355 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Acap1Q8K2H4 740 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Guca1bQ8VBV8 201 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pcdhgb1Q91XX8 918 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Xpo5Q924C1 1204 aaKnown RBP8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ccdc86Q9JJ89 426 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Smpd3Q9JJY3 655 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ptk2bQ9QVP9 1009 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Maged1Q9QYH6 775 aaKnown RBP8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ca5bQ9QZA0 317 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Krt83E9Q1Y9 479 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm10477F6SW83 55 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cyp4f17G3UW78 524 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Stmn3O70166 180 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pde4aO89084 844 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 LtfP08071 707 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 GsnP13020 780 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 JundP15066 341 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Kcnn3P58391 732 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gpr85P60894 370 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mpp1P70290 466 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 BmxP97504 651 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Oas1fQ14AZ4 364 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cpne9Q1RLL3 553 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Fam198bQ3UPI1 517 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ppp1r26Q6A025 1163 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Olfr392Q7TRX6 312 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zdhhc17Q80TN5 632 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 TbcelQ8C5W3 424 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Parp9Q8CAS9 866 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 LipmQ8K2A6 422 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Nsl1Q8K305 281 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Vmn1r188Q8K3N2 308 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Epm2aip1Q8VEH5 606 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rsph1Q8VIG3 301 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Isoc1Q91V64 297 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Spef1Q99JL1 234 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mccc1Q99MR8 717 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 PirQ9D711 290 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cab39lQ9DB16 337 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ampd2Q9DBT5 798 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Acox2Q9QXD1 681 aa8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ruvbl2Q9WTM5 463 aaKnown RBP8.31□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tle2Q9WVB2 767 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms