RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Rps6ka1P18653 724 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Polr2fP61219 127 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ypel5P62700 121 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Q3TYS2 187 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Hdhd2Q3UGR5 259 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 AcdQ5EE38 416 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Zswim9Q6DI92 447 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 SrlQ7TQ48 910 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pcdh8Q7TSK3 1070 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cdkn3Q810P3 211 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Znf451Q8C0P7 1056 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 PreplQ8C167 725 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Zswim4Q8C7B8 1101 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Efcab8Q8C9R9 203 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Spp2Q8K1I3 203 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pcdhb11Q91UZ8 797 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Abcg4Q91WA9 646 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ugp2Q91ZJ5 508 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 AasdhpptQ9CQF6 309 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ctnnbl1Q9CWL8 563 aaKnown RBP17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Tsga13Q9DA17 273 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Hsd3b7Q9EQC1 369 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Uchl3Q9JKB1 230 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 NbeaQ9EPN1 2936 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 C7D3YXF5 845 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Sod1P08228 154 aaKnown RBP17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 FaslgP41047 279 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 SiaeP70665 541 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cbx1P83917 185 aaKnown RBP17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Uap1l1Q3TW96 507 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 AcrbpQ3V140 540 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Spata13Q5DU57 656 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Mapk10Q61831 464 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Muc19Q6JHY2 733 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Taf1cQ6PDZ2 836 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Naa15Q80UM3 865 aaKnown RBP17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Sh3rf3Q8C120 878 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Fam110bQ8C739 366 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gbp5Q8CFB4 590 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ndufs1Q91VD9 727 aaKnown RBP17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Olfr459Q924H8 314 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Rps21Q9CQR2 83 aaKnown RBP17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Dtwd2Q9D0U1 298 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pcsk1nQ9QXV0 258 aa17.03■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cd151O35566 253 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 P01654 111 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 P01656 111 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 P03977 111 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 PrlP06879 226 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Myf5P24699 255 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Gna15P30678 374 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Vsnl1P62761 191 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Sap25Q1EHW4 186 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 AY761185Q5ERI8 94 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Dsg1bQ7TSF1 1060 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Znf516Q7TSH3 1157 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Vipas39Q8BGQ1 491 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 FicdQ8BIX9 458 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Ptk7Q8BKG3 1062 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Wdr59Q8C0M0 992 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 CenpuQ8C4M7 410 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Ccdc87Q8CDL9 855 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Klk13Q8CGR6 276 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Spata2Q8K004 515 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 BroxQ8K2Q7 411 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Lrrc42Q8R2U7 421 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Mthfd1Q922D8 935 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Arfgap2Q99K28 520 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Rnf34Q99KR6 376 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Pex6Q99LC9 981 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 SncaipQ99ME3 962 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Tmem30cQ9D4D7 342 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Cnot8Q9D8X5 292 aa17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 Prpf4Q9DAW6 521 aaKnown RBP17.02■□□□□ 0.31
Trim54-201ENSMUST00000013771 6720489N17RikA0A1Y7VJW0 127 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Vmn2r116E9Q6I0 856 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 DffaO54786 331 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 TrhrP21761 393 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Csf2rbP26955 896 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Tbx4P70325 552 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Neurog2P70447 263 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 RnaselQ05921 735 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Inf2Q0GNC1 1273 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Fbxw18Q3TSA9 469 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Mex3dQ3UE17 643 aaKnown RBP17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Klhl5Q6PFE1 708 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Kyat3Q71RI9 455 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Fnip2Q80TD3 1108 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Rnaseh2bQ80ZV0 308 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Znf770Q8BIQ8 705 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Ccdc28aQ8CEI3 192 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Pcdhb1Q91Y08 818 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Rcc1lQ9CYF5 461 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 IdeQ9JHR7 1019 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Rps6kb2Q9Z1M4 485 aa17.01■□□□□ 0.31
Trim54-201ENSMUST00000013771 Fam46dB1ATX6 390 aa17■□□□□ 0.31
Trim54-201ENSMUST00000013771 Catsperg2C6KI89 1145 aa17■□□□□ 0.31
Trim54-201ENSMUST00000013771 Gm2030D3Z7C4 212 aa17■□□□□ 0.31
Trim54-201ENSMUST00000013771 Sult3a1O35403 293 aa17■□□□□ 0.31
Trim54-201ENSMUST00000013771 Mybl1P51960 751 aa17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms