RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Cyb561d2Q9WUE3 222 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ssxb6A2BI74 170 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm3259D3YUK0 475 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cbx3P23198 183 aaKnown RBP12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Mmp3P28862 477 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Dnajc5P60904 198 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 CtscP97821 462 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gpr162Q3UN16 588 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 D3Ertd751eQ8BGN2 192 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cgrrf1Q8BMJ7 332 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Elmo1Q8BPU7 727 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rsph1Q8VIG3 301 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Far1Q922J9 515 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 HnrnpabQ99020 285 aaKnown RBP12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Pmf1Q9CPV5 202 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Pole4Q9CQ36 118 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Nos1apQ9D3A8 503 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Timm50Q9D880 353 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Hmg20aQ9DC33 346 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ccdc86Q9JJ89 426 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Sh3glb1Q9JK48 365 aa12.73□□□□□ -0.37
Msh6-201ENSMUST00000005503 Tjp1P39447 1745 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 H2-M9O19442 342 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Odc1P00860 461 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Hspa1bP17879 642 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Atoh1P48985 351 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Hsd11b2P51661 386 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Muc1Q02496 630 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cntn3Q07409 1028 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Fscn2Q32M02 492 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Myo1dQ5SYD0 1006 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Zfp90Q61967 636 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Mrps35Q8BJZ4 320 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Prdm8Q8BZ97 687 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rnf8Q8VC56 488 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Mrpl45Q9D0Q7 306 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Spata1Q9D5R4 444 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Habp4Q9JKS5 411 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Sbno2Q7TNB8 1349 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Znf536Q8K083 1302 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Klhl32A2AJX0 620 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 S100zB9EJL3 99 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Vmn2r1O70410 912 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Svs4P18419 113 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gria1P23818 907 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cd19P25918 547 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Aarsd1Q3THG9 412 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Srbd1Q497V5 1015 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Dlx3Q64205 287 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cyp2c54Q6XVG2 490 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Suz12Q80U70 741 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Dhx33Q80VY9 698 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Amigo2Q80ZD9 519 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 FicdQ8BIX9 458 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Fam20bQ8VCS3 409 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Q9D937 123 aaKnown RBP12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 IgtpQ9DCE9 423 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ndel1Q9ERR1 345 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Aldh1a3Q9JHW9 512 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 CtsrQ9JIA9 334 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Clcn5Q9WVD4 746 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Deaf1Q9Z1T5 566 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cylc2B1AWN8 422 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Smpdl3bP58242 456 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Itga11P61622 1188 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 WasP70315 520 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm136Q3V037 328 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ei24Q61070 340 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Lpcat4Q6NVG1 524 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Senp5Q6NXL6 749 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Olfr867Q7TRF3 331 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cndp1Q8BUG2 492 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ppme1Q8BVQ5 386 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Olfr589Q8VGV8 317 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Tcf7l2Q924A0 459 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cybrd1Q925G2 290 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Trim12aQ99PQ1 284 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gpr45Q9EQQ4 373 aa12.72□□□□□ -0.37
Msh6-201ENSMUST00000005503 Pgap3A2A559 320 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Lipo4D3Z608 396 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 NmbrO54799 390 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 H2-AaP01910 256 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Hsd17b4P51660 735 aaKnown RBP12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ctps2P70303 586 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Scn3bQ8BHK2 215 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Nipal1Q8BMW7 416 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Kcnv1Q8BZN2 503 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Chst15Q91XQ5 561 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Stard13Q923Q2 1113 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Hspa12bQ9CZJ2 685 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rhox9Q9EQM5 227 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Asap1Q9QWY8 1147 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Slc7a8Q9QXW9 531 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Map2k3O09110 347 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Vti1bO88384 232 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 S100a6P14069 89 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Il1rnP25085 178 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Atp6v1e1P50518 226 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Adra1dP97714 562 aa12.71□□□□□ -0.37
Msh6-201ENSMUST00000005503 Pla2g4dQ50L43 825 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms