RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 NOMO3P69849 1222 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 ARHGEF7Q14155 803 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 KCTD16Q68DU8 428 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 LVRNQ6Q4G3 990 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 BNIPLQ7Z465 357 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 FAM46DQ8NEK8 389 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 ATL2Q8NHH9 583 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 JOSD2Q8TAC2 188 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 SLC20A1Q8WUM9 679 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 VOPP1Q96AW1 172 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 HMCESQ96FZ2 354 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 KLC2Q9H0B6 622 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 NDST4Q9H3R1 872 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 PCDH12Q9NPG4 1184 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 STARD5Q9NSY2 213 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 RNF215Q9Y6U7 377 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 UNC13CQ8NB66 2214 aa15.14■□□□□ 0.01
SYNE2-228ENST00000639659 ZSCAN5CA6NGD5 496 aaPredicted RBP15.13■□□□□ 0.01
SYNE2-228ENST00000639659 ITGB2P05107 769 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 EPHB2P29323 1055 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 LIG3P49916 1009 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 PEX5P50542 639 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 TBR1Q16650 682 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 AMZ1Q400G9 498 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 TMEM52BQ4KMG9 183 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 ERAP2Q6P179 960 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 FAM114A1Q8IWE2 563 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 PYROXD2Q8N2H3 581 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 OR6C4Q8NGE1 309 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 FAM172AQ8WUF8 416 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 CMKLR1Q99788 373 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 DPEP2Q9H4A9 486 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 MRPL40Q9NQ50 206 aaKnown RBP15.13■□□□□ 0.01
SYNE2-228ENST00000639659 DKK3Q9UBP4 350 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 NEU3Q9UQ49 428 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 DAAM1Q9Y4D1 1078 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 SPTA1P02549 2419 aa15.13■□□□□ 0.01
SYNE2-228ENST00000639659 RASA4BC9J798 803 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 TERTO14746 1132 aaKnown RBP15.12■□□□□ 0.01
SYNE2-228ENST00000639659 NVLO15381 856 aaKnown RBP15.12■□□□□ 0.01
SYNE2-228ENST00000639659 RASA4O43374 803 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 CREB3O43889 395 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 PPFIA2O75334 1257 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 GFPT2O94808 682 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 WT1P19544 449 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-228ENST00000639659 NRG1Q02297 640 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-228ENST00000639659 KLHDC7AQ5VTJ3 777 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 SCYL2Q6P3W7 929 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 SPRED1Q7Z699 444 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 PLA2G15Q8NCC3 412 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 SLC30A5Q8TAD4 765 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 EPS8L1Q8TE68 723 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 OR1E3Q8WZA6 343 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 TUBGCP2Q9BSJ2 902 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 ZMYND15Q9H091 742 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 RDH14Q9HBH5 336 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 AKAP7Q9P0M2 348 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-228ENST00000639659 LRIT1Q9P2V4 623 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 LHX3Q9UBR4 397 aa15.12■□□□□ 0.01
SYNE2-228ENST00000639659 UBA2Q9UBT2 640 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-228ENST00000639659 CXorf51AA0A1B0GTR3 108 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 CACNB4O00305 520 aaPredicted RBP15.11■□□□□ 0.01
SYNE2-228ENST00000639659 GLB1P16278 677 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 ITGB6P18564 788 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 PPM1FP49593 454 aaPredicted RBP15.11■□□□□ 0.01
SYNE2-228ENST00000639659 BIRC2Q13490 618 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 UGP2Q16851 508 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 C14orf28Q4W4Y0 310 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 EFHC2Q5JST6 749 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 COLEC12Q5KU26 742 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 CERCAMQ5T4B2 595 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 TMPRSS9Q7Z410 1059 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 PTRH1Q86Y79 214 aaKnown RBP15.11■□□□□ 0.01
SYNE2-228ENST00000639659 RTL3Q8N8U3 475 aaKnown RBP15.11■□□□□ 0.01
SYNE2-228ENST00000639659 GPR156Q8NFN8 814 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 OR56A4Q8NGH8 313 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 HTR3CQ8WXA8 447 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 CASKIN2Q8WXE0 1202 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 RBM15Q96T37 977 aaKnown RBP eCLIP15.11■□□□□ 0.01
SYNE2-228ENST00000639659 TMEM168Q9H0V1 697 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 SEMA6CQ9H3T2 930 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 SUV39H2Q9H5I1 410 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 NOL6Q9H6R4 1146 aaKnown RBP15.11■□□□□ 0.01
SYNE2-228ENST00000639659 CYP4F12Q9HCS2 524 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 FGF22Q9HCT0 170 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 KIAA1468Q9P260 1216 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 ACSL6Q9UKU0 697 aa15.11■□□□□ 0.01
SYNE2-228ENST00000639659 TMEM202A6NGA9 273 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 C2CD4BA6NLJ0 364 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 A8MX80 341 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 C9orf172C9J069 976 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 F8VZ95 297 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 TEX33O43247 280 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 SUV39H1O43463 412 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 SFTPCP11686 197 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 UCHL3P15374 230 aa15.1■□□□□ 0.01
SYNE2-228ENST00000639659 MAZP56270 477 aaKnown RBP15.1■□□□□ 0.01
SYNE2-228ENST00000639659 HDAC4P56524 1084 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms