RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 GP5P40197 560 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 EIF2DP41214 584 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CTSOP43234 321 aaPredicted RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 RECQLP46063 649 aaPredicted RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 GRIA4P48058 902 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 EPHB1P54762 984 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 ST8SIA6P61647 398 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TRAF2Q12933 501 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 DNAJC3Q13217 504 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 MSLNQ13421 630 aaPredicted RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 RUNX3Q13761 415 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 GALNT3Q14435 633 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 EIF4HQ15056 248 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 E2F5Q15329 346 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TAF1AQ15573 450 aaPredicted RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 UGP2Q16851 508 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 MYLK3Q32MK0 819 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 ACCSLQ4AC99 568 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CARD16Q5EG05 197 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 ATXN7L2Q5T6C5 722 aaPredicted RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TEDDM1Q5T9Z0 273 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 GRTP1Q5TC63 336 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CES3Q6UWW8 571 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TRABD2AQ86V40 505 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 EXOC3L1Q86VI1 746 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 ETFBKMTQ8IXQ9 262 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 LMNTD2Q8IXW0 634 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 SRRM1Q8IYB3 904 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CYP4X1Q8N118 509 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 NDUFAF2Q8N183 169 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 RYBPQ8N488 228 aaPredicted RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 KDM1BQ8NB78 822 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 SMRP1Q8NCR6 262 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 LPCAT1Q8NF37 534 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CALML6Q8TD86 181 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 STYXQ8WUJ0 223 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 ALKBH8Q96BT7 664 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 MYO19Q96H55 970 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 RPL10LQ96L21 214 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 UHRF1Q96T88 793 aaPredicted RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 SELENOSQ9BQE4 189 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TRIM56Q9BRZ2 755 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 C1QTNF1Q9BXJ1 281 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CPEB1Q9BZB8 566 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TM6SF2Q9BZW4 377 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CIPCQ9C0C6 399 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TRABDQ9H4I3 376 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 EBF3Q9H4W6 596 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 SSU72Q9NP77 194 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 SMYD2Q9NRG4 433 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 TREX1Q9NSU2 369 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.59□□□□□ -1.192e-24■□□□□ 9
PTP4A1-206ENST00000627002 DEC1Q9P2X7 70 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 EPS15L1Q9UBC2 864 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CD207Q9UJ71 328 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CDH22Q9UJ99 828 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 SMG5Q9UPR3 1016 aaKnown RBP7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 ERVW-1Q9UQF0 538 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 PCDHGC4Q9Y5F7 938 aa7.59□□□□□ -1.19
PTP4A1-206ENST00000627002 CHD7Q9P2D1 2997 aa7.59□□□□□ -1.2
PTP4A1-206ENST00000627002 DENND4CQ5VZ89 1909 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ANKRD66B4E2M5 251 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 WASH3PC4AMC7 463 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 TRIM49D1C9J1S8 452 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 TRAFD1O14545 582 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PRPF4O43172 522 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC7A4O43246 635 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 HTRA2O43464 458 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 LDB2O43679 373 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 FZD6O60353 706 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 SIN3BO75182 1162 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 TULP3O75386 442 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ZNF821O75541 412 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PIAS1O75925 651 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 FAM155BO75949 473 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 VAPBO95292 243 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PGLSO95336 258 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PRLP01236 227 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 BRAFP15056 766 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 SPRP35270 261 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 LTBRP36941 435 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 HADHAP40939 763 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ARCN1P48444 511 aaKnown RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 STK19P49842 368 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ATP1A2P50993 1020 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC18A1P54219 525 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 GYS2P54840 703 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 CSE1LP55060 971 aaKnown RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PRAMEP78395 509 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ACVR1Q04771 509 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 GABPB1Q06547 395 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 DLX2Q07687 328 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 THOC5Q13769 683 aaKnown RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ADGRE1Q14246 886 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 DLG2Q15700 870 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 CNGA3Q16281 694 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 QPCTQ16769 361 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 GEN1Q17RS7 908 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 HSP90AA5PQ58FG0 334 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms