RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 IZUMO3Q5VZ72 239 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 NAPEPLDQ6IQ20 393 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 RANBP10Q6VN20 620 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 HOOK3Q86VS8 718 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 NAT8LQ8N9F0 302 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 BBOF1Q8ND07 529 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 IFT43Q96FT9 208 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 PPP1R16AQ96I34 528 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 FSD1LQ9BXM9 530 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 WHRNQ9P202 907 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 SCML1Q9UN30 329 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 CHKBQ9Y259 395 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 PCDHB9Q9Y5E1 797 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 TCRBV7S3A2A0A539 114 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 PROB1E7EW31 1015 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 SMAPO00193 183 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 RPP40O75818 363 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 NDST3O95803 873 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 PDHA1P08559 390 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 LMAN1P49257 510 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 MORF4L2Q15014 288 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 USP39Q53GS9 565 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 CFAP58Q5T655 872 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 ANKRD22Q5VYY1 191 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 LINC00523Q86TU6 105 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 ZSWIM9Q86XI8 627 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 MCUQ8NE86 351 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 PDCD6IPQ8WUM4 868 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 PIH1D2Q8WWB5 315 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 GAB3Q8WWW8 586 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 PRCCQ92733 491 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 FAM122AQ96E09 287 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 SIPA1Q96FS4 1042 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 TBL1YQ9BQ87 522 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 FICDQ9BVA6 458 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 ADGRE3Q9BY15 652 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 DPH5Q9H2P9 285 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 SEMA4AQ9H3S1 761 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 ARNT2Q9HBZ2 717 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 SHOC2Q9UQ13 582 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 INVSQ9Y283 1065 aa19.97■□□□□ 0.79
PDLIM2-221ENST00000622702 C16orf96A6NNT2 1141 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 TP73O15350 636 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 TMEM63AO94886 807 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 AGTP01019 485 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 ATXN1LP0C7T5 689 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 HLA-DPA1P20036 260 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 TNNT3P45378 269 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 METAP1P53582 386 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 POLR2LP62875 67 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 GUCY2DQ02846 1103 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 SIM2Q14190 667 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 SPARCL1Q14515 664 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 SYCP2LQ5T4T6 812 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 HIBCHQ6NVY1 386 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 KIAA1324Q6UXG2 1013 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 CEP68Q76N32 757 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 ARRDC3Q96B67 414 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 HDAC8Q9BY41 377 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 PABPC3Q9H361 631 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 GRHL1Q9NZI5 618 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 PHTF1Q9UMS5 762 aa19.96■□□□□ 0.79
PDLIM2-221ENST00000622702 MID1O15344 667 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 CPP00450 1065 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 DNTTP04053 509 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 RHOXF2BP0C7M4 288 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 GRIA4P48058 902 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 ITGA8P53708 1063 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 CALCOCO2Q13137 446 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 SLC1A5Q15758 541 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 DENND5AQ6IQ26 1287 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 PRR23BQ6ZRT6 265 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 PARS2Q7L3T8 475 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 KDELC2Q7Z4H8 507 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 RLN3Q8WXF3 142 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 FAM131CQ96AQ9 280 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 RHOXF2Q9BQY4 288 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 EPC1Q9H2F5 836 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 EPB41L5Q9HCM4 733 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 DYRK4Q9NR20 520 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 PPIL1Q9Y3C6 166 aa19.95■□□□□ 0.78
PDLIM2-221ENST00000622702 ANKRD66B4E2M5 251 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 USP12O75317 370 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 FGF1P05230 155 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 TIMP2P16035 220 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 DRD3P35462 400 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 PLA2G5P39877 138 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 CHRNA4P43681 627 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 SUOXP51687 545 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 TERF1P54274 439 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 SARNPP82979 210 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 SFSWAPQ12872 951 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 OLIG2Q13516 323 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 QPCTQ16769 361 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 UGP2Q16851 508 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 POM121L1PQ3SYA9 428 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 TTC31Q49AM3 519 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 SIRPB2Q5JXA9 342 aa19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 ERN2Q76MJ5 926 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-221ENST00000622702 CACUL1Q86Y37 369 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms