RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ADGRG5Q8IZF4 528 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 CARNMT1Q8N4J0 409 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 MTMR14Q8NCE2 650 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 OR6Q1Q8NGQ2 317 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 JOSD2Q8TAC2 188 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 STON2Q8WXE9 905 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 HERVK_113Q902F9 699 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 PIK3R3Q92569 461 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 PMEPA1Q969W9 287 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 ATP6V1E2Q96A05 226 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 IL12RB2Q99665 862 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 C17orf62Q9BQA9 187 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 TRIM15Q9C019 465 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 PORCNQ9H237 461 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 IFT22Q9H7X7 185 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 ZNF395Q9H8N7 513 aaPredicted RBP7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 TIGARQ9NQ88 270 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 WASH6PQ9NQA3 447 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 RPRD1BQ9NQG5 326 aaKnown RBP7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 DDX28Q9NUL7 540 aaKnown RBP7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 CYTH4Q9UIA0 394 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 PHIPQ8WWQ0 1821 aa7.55□□□□□ -1.2
TRIM49B-202ENST00000622138 LOC100653049A0A140TA62 436 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TCRBV3S1A0A5B6 114 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 MAGEB16A2A368 324 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 RGSL1A5PLK6 1076 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 A8MX80 341 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 INO80B-WBP1J3KQ70 363 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 DCXO43602 365 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PEX10O60683 326 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 KRT34O76011 436 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ALDH1A2O94788 518 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 EPN2O95208 641 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 KCNH1O95259 989 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TRIM16O95361 564 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 MAP3K6O95382 1288 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 DLGAP3O95886 979 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ASS1P00966 412 aaKnown RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 SERPINE1P05121 402 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ITGAVP06756 1048 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TRAPPC2P0DI81 140 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TRAPPC2BP0DI82 140 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 FGFR3P22607 806 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PTPN7P35236 360 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ARL2P36404 184 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TALDO1P37837 337 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC1A6P48664 564 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 RACK1P63244 317 aaKnown RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 GPLD1P80108 840 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC25A11Q02978 314 aaKnown RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CAPSQ13938 189 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TYSND1Q2T9J0 566 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ESCO2Q56NI9 601 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CLVS2Q5SYC1 327 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CCNYL2Q5T2Q4 361 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 LRRC38Q5VT99 294 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 MBLAC2Q68D91 279 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 IGDCC3Q8IVU1 814 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 KIAA0319LQ8IZA0 1049 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PHTF2Q8N3S3 785 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ACTL9Q8TC94 416 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ANKRD49Q8WVL7 239 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PBXIP1Q96AQ6 731 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PDGFDQ9GZP0 370 aaPredicted RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 SEMA6AQ9H2E6 1030 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PDZD7Q9H5P4 517 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PLEKHA5Q9HAU0 1116 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ZNF214Q9UL59 606 aaPredicted RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CNOT6Q9ULM6 557 aaKnown RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PCDHGC3Q9UN70 934 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 RAD54BQ9Y620 910 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 C16orf96A6NNT2 1141 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ATP6V1G2-DDX39BF2Z307 99 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ZNF195O14628 629 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 AIM2O14862 343 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PAPSS1O43252 624 aaPredicted RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ZBTB14O43829 449 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TADA2AO75478 443 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TOM1L1O75674 476 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ZMPSTE24O75844 475 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 SLITRK5O94991 958 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 IL18RAPO95256 599 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 VAPBO95292 243 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 YES1P07947 543 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 WEE2P0C1S8 567 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 GFAPP14136 432 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ATF6P18850 670 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 RPL22P35268 128 aaKnown RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 HTR2BP41595 481 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 GABRB2P47870 512 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ALDH7A1P49419 539 aaKnown RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 NDST1P52848 882 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 OLR1P78380 273 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 MPP1Q00013 466 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 BNC1Q01954 994 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms