RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 SLC15A3Q8IY34 581 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 OR2T34Q8NGX1 318 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 OR2T3Q8NH03 318 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 TRIM45Q9H8W5 580 aaPredicted RBP12.56□□□□□ -0.4
SYNRG-229ENST00000621136 FBXO28Q9NVF7 368 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 C14orf119Q9NWQ9 140 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 MALT1Q9UDY8 824 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 CCR10P46092 362 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 FAM45BPQ6NSW5 357 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 DSG4Q86SJ6 1040 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 C12orf56Q8IXR9 622 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 FAM126BQ8IXS8 530 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 MZB1Q8WU39 189 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 XPR1Q9UBH6 696 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 SF3B1O75533 1304 aaKnown RBP eCLIP12.56□□□□□ -0.43e-9■■■■■ 64.2
SYNRG-229ENST00000621136 MYH9P35579 1960 aaKnown RBP12.56□□□□□ -0.4
SYNRG-229ENST00000621136 TAF1LQ8IZX4 1826 aa12.56□□□□□ -0.4
SYNRG-229ENST00000621136 S100A9P06702 114 aaKnown RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 CES1P23141 567 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 CDH8P55286 799 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 MED22Q15528 200 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 RNF111Q6ZNA4 994 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 THAP5Q7Z6K1 395 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 HM13Q8TCT9 377 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 NOX1Q9Y5S8 564 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 A0A1W2PRG6 482 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 SLCO1B7G3V0H7 640 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 TIMM44O43615 452 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 ITGB5P18084 799 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 SLFN12LQ6IEE8 588 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF544Q6NX49 715 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 URGCPQ8TCY9 931 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 MRPS7Q9Y2R9 242 aaKnown RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 TMEM233B4DJY2 109 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 ZW10O43264 779 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 BUD23O43709 281 aaKnown RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 FPGSQ05932 587 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 AMHR2Q16671 573 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 UGCGQ16739 394 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 CCNYL2Q5T2Q4 361 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 OR52K1Q8NGK4 314 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 MCOLN3Q8TDD5 553 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 TRNT1Q96Q11 434 aaKnown RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 RMDN3Q96TC7 470 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 KCNH7Q9NS40 1196 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 STK32BQ9NY57 414 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 GMPPBQ9Y5P6 360 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 ASB14A6NK59 587 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 TMX2-CTNND1H3BSU7 103 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 APOC4-APOC2K7ER74 178 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 ICMTO60725 284 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 APOC2P02655 101 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 LTFP02788 710 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 NPTX2P47972 431 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 MYL6P60660 151 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 GTF2BQ00403 316 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 OGDHQ02218 1023 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 PTP4A2Q12974 167 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 CES4AQ5XG92 561 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 SH3BP5LQ7L8J4 393 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 GPR180Q86V85 440 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 HDAC10Q969S8 669 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 GATA5Q9BWX5 397 aaPredicted RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 C20orf27Q9GZN8 174 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 DBNDD1Q9H9R9 158 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 KLHL3Q9UH77 587 aa12.55□□□□□ -0.4
SYNRG-229ENST00000621136 CCNL1Q9UK58 526 aaPredicted RBP12.55□□□□□ -0.4
SYNRG-229ENST00000621136 LAMB2P55268 1798 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ANKRD34BA5PLL1 514 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 H3BNH8 94 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ITGAVP06756 1048 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 FMO3P31513 532 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 NFATC3Q12968 1075 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 BEST2Q8NFU1 509 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 IL31RAQ8NI17 732 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 LRRC40Q9H9A6 602 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 INIPQ9NRY2 104 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CISHQ9NSE2 258 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 PDE10AQ9Y233 779 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 COQ4Q9Y3A0 265 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 SNCAIPQ9Y6H5 919 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 DNMT3AQ9Y6K1 912 aaPredicted RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CAPN14A8MX76 684 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 H3BMQ9 156 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 AQP9O43315 295 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 PLIN3O60664 434 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ADAM23O75077 832 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ATP5BP06576 529 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 GNAO1P09471 354 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 TSPAN19P0C672 248 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms