RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 SUCLG1P53597 346 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PRRX1P54821 245 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 NCALDP61601 193 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CREMQ03060 361 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 OCA2Q04671 838 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ZNF33AQ06730 810 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 MN1Q10571 1320 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 NAIPQ13075 1403 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 BAMBIQ13145 260 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 SELENBP1Q13228 472 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ZNF177Q13360 481 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PDCLQ13371 301 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 NFIXQ14938 502 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TMEM132BQ14DG7 1078 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 SEC23BQ15437 767 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ANKRD20A4Q4UJ75 823 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 SEZ6Q53EL9 994 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 SH3PXD2AQ5TCZ1 1133 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ATF7IP2Q5U623 682 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ACAD10Q6JQN1 1059 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 MAPKAPK5Q8IW41 473 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 BBS7Q8IWZ6 715 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 FAM217AQ8IXS0 508 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RCOR2Q8IZ40 523 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RTL3Q8N8U3 475 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 UBA3Q8TBC4 463 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 HASPINQ8TF76 798 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 KCTD4Q8WVF5 259 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TMEM40Q8WWA1 233 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PSPC1Q8WXF1 523 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 EDEM1Q92611 657 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 STAMQ92783 540 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PHKBQ93100 1093 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 NMD3Q96D46 503 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CALML4Q96GE6 196 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ZNF486Q96H40 463 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PPP1R36Q96LQ0 422 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RAB3IPQ96QF0 476 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 THUMPD3Q9BV44 507 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TDRD1Q9BXT4 1180 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PABPC3Q9H361 631 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TDRD3Q9H7E2 651 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 UNKLQ9H9P5 680 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 NMUR1Q9HB89 426 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TRIM39Q9HCM9 518 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 GDE1Q9NZC3 331 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 MAD2L2Q9UI95 211 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 DNAJC12Q9UKB3 198 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 POU2F3Q9UKI9 436 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PCDHB10Q9UN67 800 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PCDHGB4Q9UN71 923 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 LIPT1Q9Y234 373 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 B3GNT3Q9Y2A9 372 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 MFHAS1Q9Y4C4 1052 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CAPN6Q9Y6Q1 641 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PCM1Q15154 2024 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CDK13Q14004 1512 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 VPS37CA5D8V6 355 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PRR23AA6NEV1 266 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 EIF4E1BA6NMX2 242 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RHPN2P1A8MT19 583 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 H3BML4 177 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TXNDC9O14530 226 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 BACH1O14867 736 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 KIAA0355O15063 1070 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TM9SF1O15321 606 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 NUDT21O43809 227 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CYTIPO60759 359 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 NSA2O95478 260 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PF4P02776 101 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 GSNP06396 782 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 INHBBP09529 407 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PRR35P0CG20 571 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RARAP10276 462 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ESRRAP11474 423 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RRM2P31350 389 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PCGF2P35227 344 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CCR5P51681 352 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 DCDC1P59894 354 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RAB4BP61018 213 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 HTRA3P83110 453 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CD300CQ08708 224 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RESTQ13127 1097 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 GPM6BQ13491 265 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CAPRIN1Q14444 709 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 ZNF267Q14586 743 aaPredicted RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 VEPH1Q14D04 833 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PTPRRQ15256 657 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 MTFR1Q15390 333 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CYP2A13Q16696 494 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 TSTQ16762 297 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CCDC142Q17RM4 750 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 CTXN3Q4LDR2 81 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 SLC9B1Q4ZJI4 515 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 PTRHD1Q6GMV3 140 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RINT1Q6NUQ1 792 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 RWDD4Q6NW29 188 aaKnown RBP3.06□□□□□ -1.92
CBWD3-209ENST00000614377 C5orf46Q6UWT4 87 aa3.06□□□□□ -1.92
CBWD3-209ENST00000614377 SV2BQ7L1I2 683 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms