RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TCEA2Q15560 299 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 TMEM52BQ4KMG9 183 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 ATP13A4Q4VNC1 1196 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 BOLA3Q53S33 107 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 CFAP58Q5T655 872 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 PDZD3Q86UT5 571 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 PARGQ86W56 976 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 DCP2Q8IU60 420 aaKnown RBP13.87□□□□□ -0.19
SCAF1-203ENST00000598359 TP53I13Q8NBR0 393 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-203ENST00000598359 DENND6BQ8NEG7 585 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 ZNF548Q8NEK5 533 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-203ENST00000598359 LMX1AQ8TE12 382 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 ATP13A3Q9H7F0 1226 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 IP6K2Q9UHH9 426 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 NENFQ9UMX5 172 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 ASXL3Q9C0F0 2248 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 LY6G6EA0A0G2JKS1 128 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 A8MX80 341 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 K7ESM1 405 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 SCAMP1O15126 338 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 C1SP09871 688 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 C6P13671 934 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 NME1P15531 152 aaKnown RBP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 ACP1P24666 158 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 MMP12P39900 470 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 LIG3P49916 1009 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 SCNN1BP51168 640 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 THOP1P52888 689 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 CDH6P55285 790 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 HNRNPKP61978 463 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 TARDBPQ13148 414 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 C1orf61Q13536 156 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 KRT81Q14533 505 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 LBRQ14739 615 aaKnown RBP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 WSCD2Q2TBF2 565 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 DEFB133Q30KQ1 61 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 TMPRSS12Q86WS5 348 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 PGBD5Q8N414 524 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 PAF1Q8N7H5 531 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 NIPA2Q8N8Q9 360 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 FAM174AQ8TBP5 190 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 ZNF564Q8TBZ8 553 aaPredicted RBP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 TEKT4Q8WW24 435 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 IQCDQ96DY2 449 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 IFT43Q96FT9 208 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 APOLD1Q96LR9 279 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 ZNF641Q96N77 438 aaPredicted RBP13.86□□□□□ -0.19
SCAF1-203ENST00000598359 ATP8A1Q9Y2Q0 1164 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 RAXQ9Y2V3 346 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 U3KQA8 63 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 MAST4O15021 2626 aa13.86□□□□□ -0.19
SCAF1-203ENST00000598359 GOLGA4Q13439 2230 aaKnown RBP13.85□□□□□ -0.19
SCAF1-203ENST00000598359 MYO1FO00160 1098 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 AQP9O43315 295 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 MAFKO60675 156 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 GCATO75600 419 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 MAP3K6O95382 1288 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 PEX11BO96011 259 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 PCCBP05166 539 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 CELA2BP08218 269 aaPredicted RBP13.85□□□□□ -0.19
SCAF1-203ENST00000598359 IL4RP24394 825 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 SERPINA4P29622 427 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 CSNK1DP48730 415 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 ZNF135P52742 658 aaPredicted RBP13.85□□□□□ -0.19
SCAF1-203ENST00000598359 MAXP61244 160 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 INSM1Q01101 510 aaPredicted RBP13.85□□□□□ -0.19
SCAF1-203ENST00000598359 BCL2L1Q07817 233 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 ELP6Q0PNE2 266 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 ZNF235Q14590 738 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 LRRC14Q15048 493 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 TMCO4Q5TGY1 634 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 ERAP2Q6P179 960 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 BRAT1Q6PJG6 821 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 LZTR1Q8N653 840 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 HCAR2Q8TDS4 363 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 LRRN4Q8WUT4 740 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 PSKH2Q96QS6 385 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 C1QTNF7Q9BXJ2 289 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 NLGN3Q9NZ94 848 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 CTTNBP2NLQ9P2B4 639 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 SEPT3Q9UH03 358 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 OR1A2Q9Y585 309 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 PCDHGC4Q9Y5F7 938 aa13.85□□□□□ -0.19
SCAF1-203ENST00000598359 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCAF1-203ENST00000598359 TMEM110-MUSTN1A8MSY1 372 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 H3BM21 787 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 TRAFD1O14545 582 aaPredicted RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 LZTS3O60299 673 aaPredicted RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 ALPPL2P10696 532 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 CKMT1AP12532 417 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 HNRNPH3P31942 346 aaKnown RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 HNF1BP35680 557 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 SUOXP51687 545 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 TERF1P54274 439 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 TAS2R40P59535 323 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms