RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 MSX2P35548 267 aaPredicted RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 CLCN5P51795 746 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 CDH8P55286 799 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 CCL23P55773 120 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 WNT3AP56704 352 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ANTXR2P58335 489 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 CYP4A11Q02928 519 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 GBE1Q04446 702 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 SRSF1Q07955 248 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 AIMP2Q13155 320 aaKnown RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ATP1A4Q13733 1029 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 BMPR2Q13873 1038 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 PTK6Q13882 451 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ARHGEF7Q14155 803 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 MEP1BQ16820 701 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 HFEQ30201 348 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 WDR72Q3MJ13 1102 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 SLC39A12Q504Y0 691 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 TCEAL5Q5H9L2 206 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 DCAF17Q5H9S7 520 aaPredicted RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ATXN7L2Q5T6C5 722 aaPredicted RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 UBAP2Q5T6F2 1119 aaKnown RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 APOBEC3HQ6NTF7 200 aaKnown RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 DSG4Q86SJ6 1040 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 DTX1Q86Y01 620 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 WDR63Q8IWG1 891 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 CNTN4Q8IWV2 1026 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 SFRP1Q8N474 314 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ANKRD44Q8N8A2 993 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 IL17RCQ8NAC3 791 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 FBXO18Q8NFZ0 1043 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 OR7D4Q8NG98 312 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 DUSP19Q8WTR2 217 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ZNF480Q8WV37 535 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ANKRD49Q8WVL7 239 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 INTS4Q96HW7 963 aaKnown RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 WDFY2Q96P53 400 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 PKP4Q99569 1192 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 TACO1Q9BSH4 297 aaKnown RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 TCHPQ9BT92 498 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 MECRQ9BV79 373 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 STRA6Q9BX79 667 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 CPEB1Q9BZB8 566 aaKnown RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 RNF32Q9H0A6 362 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 SLC6A17Q9H1V8 727 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 RPAP3Q9H6T3 665 aaPredicted RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 BCAS3Q9H6U6 928 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 UNKLQ9H9P5 680 aaKnown RBP4.32□□□□□ -1.72
LINC00649-204ENST00000593977 SCPEP1Q9HB40 452 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 IL1RAPL2Q9NP60 686 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 PFDN4Q9NQP4 134 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 EHD2Q9NZN4 543 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 KCND2Q9NZV8 630 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 KLHL14Q9P2G3 628 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 IL19Q9UHD0 177 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 DNAI1Q9UI46 699 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 ZFP69BQ9UJL9 534 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 CTNND2Q9UQB3 1225 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 AURKCQ9UQB9 309 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 RCE1Q9Y256 329 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 GDAQ9Y2T3 454 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 NEU2Q9Y3R4 380 aa4.32□□□□□ -1.72
LINC00649-204ENST00000593977 SETD2Q9BYW2 2564 aaPredicted RBP4.31□□□□□ -1.72
LINC00649-204ENST00000593977 RALGAPA2Q2PPJ7 1873 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 A0A0G2JNJ9 132 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 LOC102723971A0A1B0GUV8 181 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 OR14I1A6ND48 311 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 OR6C76A6NM76 312 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 CCDC169A6NNP5 214 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 H0YC42 278 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 SNAP23O00161 211 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 HRKO00198 91 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 SLC30A4O14863 429 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 IKBKBO14920 756 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 PI15O43692 258 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 VEGFDO43915 354 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 ADAMTS4O75173 837 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 RTN2O75298 545 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 IL18BPO95998 194 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 GASTP01350 101 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 TMEM11P17152 192 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 CD6P30203 668 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 HOXA7P31268 230 aaPredicted RBP4.31□□□□□ -1.72
LINC00649-204ENST00000593977 SLC5A2P31639 672 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 CCR10P46092 362 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 GLRBP48167 497 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 CD151P48509 253 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 IFNAR2P48551 515 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 CAMLGP49069 296 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 LIG4P49917 911 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 ZNF81P51508 661 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 MRPL12P52815 198 aaKnown RBP4.31□□□□□ -1.72
LINC00649-204ENST00000593977 HMGCS2P54868 508 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 WNT3P56703 355 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 CCNA1P78396 465 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 SF3A3Q12874 501 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00649-204ENST00000593977 SPP2Q13103 211 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 TUBB2AQ13885 445 aa4.31□□□□□ -1.72
LINC00649-204ENST00000593977 CAPSQ13938 189 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms