RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 ALOX15BO15296 676 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 RNASEH1O60930 286 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SOCS5O75159 536 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 TULP3O75386 442 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 DEAF1O75398 565 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SUN1O94901 812 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 AP2A1O95782 977 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 CYP17A1P05093 508 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 IVLP07476 585 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ALADP13716 330 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 HLA-DPA1P20036 260 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 FCARP24071 287 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SERPINA4P29622 427 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SERPINH1P50454 418 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 PLTPP55058 493 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 EIF3BP55884 814 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 RHOAP61586 193 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ZXDBP98169 803 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 WASHC5Q12768 1159 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 TDGQ13569 410 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 PITRM1Q5JRX3 1037 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 FAM46CQ5VWP2 391 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ZDHHC20Q5W0Z9 365 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 HIBCHQ6NVY1 386 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 LRRC8BQ6P9F7 803 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 HDXQ7Z353 690 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 MTERF4Q7Z6M4 381 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 RAVER1Q8IY67 606 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 UBALD2Q8IYN6 164 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ZNF567Q8N184 647 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SYNPOQ8N3V7 929 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 PAF1Q8N7H5 531 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ATP11CQ8NB49 1132 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 OR13H1Q8NG92 308 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ATXN2LQ8WWM7 1075 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 MYLIPQ8WY64 445 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 CAVIN3Q969G5 261 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 IMP4Q96G21 291 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 FEM1CQ96JP0 617 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 NSUN5Q96P11 429 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 AGAP3Q96P47 875 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 NUDCD1Q96RS6 583 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 MGME1Q9BQP7 344 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 APOL5Q9BWW9 433 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 CPEB1Q9BZB8 566 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 IL22Q9GZX6 179 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 STMN4Q9H169 189 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 LINC00597Q9H2U6 94 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 TRABDQ9H4I3 376 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 NOL6Q9H6R4 1146 aaKnown RBP7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SLC2A4RGQ9NR83 387 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ELOVL2Q9NXB9 296 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 KCTD5Q9NXV2 234 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SMARCAL1Q9NZC9 954 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 VPS51Q9UID3 782 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SNX24Q9Y343 169 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 MFHAS1Q9Y4C4 1052 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 OR51B4Q9Y5P0 310 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 ATG2AQ2TAZ0 1938 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 A0A0D9SEW6 157 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 EDDM13A0A1B0GTR0 161 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 GOLGA6L10A6NI86 522 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 H3BQ06 376 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-210ENST00000590061 TRDMT1O14717 391 aaKnown RBP7.4□□□□□ -1.22
SMAD4-210ENST00000590061 INSIG1O15503 277 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 ATG13O75143 517 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 ZMPSTE24O75844 475 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 PRNPP04156 253 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 FGF1P05230 155 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 SRFP11831 508 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 PAMP19021 973 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 ACVRL1P37023 503 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 CSKP41240 450 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 RPL21P46778 160 aaKnown RBP7.4□□□□□ -1.22
SMAD4-210ENST00000590061 ITGA8P53708 1063 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 SLC7A5Q01650 507 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 PRKCQQ04759 706 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 DLX2Q07687 328 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-210ENST00000590061 CDH17Q12864 832 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 LMAN2Q12907 356 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 STARD3Q14849 445 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 ELF2Q15723 593 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 RNASEH2BQ5TBB1 312 aaKnown RBP7.4□□□□□ -1.22
SMAD4-210ENST00000590061 ALS2CLQ60I27 953 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 MBLAC2Q68D91 279 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 PARM1Q6UWI2 310 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 CYS1Q717R9 158 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 ADHFE1Q8IWW8 467 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 KLHDC8BQ8IXV7 354 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 MREGQ8N565 214 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 DNAAF3Q8N9W5 541 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 MAFAQ8NHW3 353 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-210ENST00000590061 CCDC110Q8TBZ0 833 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 PPP1R16AQ96I34 528 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 RBM15Q96T37 977 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMAD4-210ENST00000590061 RUFY1Q96T51 708 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 P2RY13Q9BPV8 354 aa7.4□□□□□ -1.22
SMAD4-210ENST00000590061 HERPUD2Q9BSE4 406 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms