RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZFAND4Q86XD8 727 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 DTX1Q86Y01 620 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 JAMLQ86YT9 394 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 CCNJLQ8IV13 435 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 SLITRK4Q8IW52 837 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PELI3Q8N2H9 469 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 RTL3Q8N8U3 475 aaKnown RBP11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PLA2G15Q8NCC3 412 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 SLC30A5Q8TAD4 765 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 OR1E3Q8WZA6 343 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 EXOC2Q96KP1 924 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 RBM15Q96T37 977 aaKnown RBP eCLIP11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PCDHB18PQ96TA0 734 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 TUBGCP2Q9BSJ2 902 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 C1QTNF7Q9BXJ2 289 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 GANQ9H2C0 597 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PDFQ9HBH1 243 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 FGF22Q9HCT0 170 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 IL17BQ9UHF5 180 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
BRCA1-225ENST00000586385 TMEM202A6NGA9 273 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-225ENST00000586385 C9orf172C9J069 976 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 SUV39H1O43463 412 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 IGSF6O95976 241 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 ITGB2P05107 769 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 SDC4P31431 198 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 MMP12P39900 470 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 RGRP47804 291 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 BLKP51451 505 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 ARSDP51689 593 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 RHOAP61586 193 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 CYP4F2P78329 520 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 RALGDSQ12967 914 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 SERINC3Q13530 473 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 CLCA4Q14CN2 919 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 AGERQ15109 404 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 TBR1Q16650 682 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 INO80DQ53TQ3 878 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-225ENST00000586385 CERCAMQ5T4B2 595 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 USP53Q70EK8 1073 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 STRADAQ7RTN6 431 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 SPRED1Q7Z699 444 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 GKN2Q86XP6 184 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 Q8N9G6 341 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-225ENST00000586385 CCL4L1Q8NHW4 92 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 FAM172AQ8WUF8 416 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 NTAN1Q96AB6 310 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 NSMCE3Q96MG7 304 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 C11orf70Q9BRQ4 267 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 FUCA2Q9BTY2 467 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 STK33Q9BYT3 514 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 STRADBQ9C0K7 418 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 MRPL40Q9NQ50 206 aaKnown RBP11.98□□□□□ -0.49
BRCA1-225ENST00000586385 KLQ9UEF7 1012 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 APPL1Q9UKG1 709 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 HPCAL4Q9UM19 191 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 DOLKQ9UPQ8 538 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 DGKBQ9Y6T7 804 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 RNF215Q9Y6U7 377 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 UBR5O95071 2799 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-225ENST00000586385 SCN8AQ9UQD0 1980 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 LRP4O75096 1905 aa11.98□□□□□ -0.49
BRCA1-225ENST00000586385 BSNQ9UPA5 3926 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 TCRBV5S1A1TA0A578 114 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 RASA4BC9J798 803 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 EPHB6O15197 1021 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 RASA4O43374 803 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 PCCBP05166 539 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 JMJD7P0C870 316 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 CTSEP14091 401 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 RFC1P35251 1148 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-225ENST00000586385 KLK7P49862 253 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 LIG3P49916 1009 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 CDR2Q01850 454 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 HLTFQ14527 1009 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■■□□□ 13.4
BRCA1-225ENST00000586385 C16orf72Q14CZ0 275 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 UGP2Q16851 508 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 MLKLQ8NB16 471 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 HCAR2Q8TDS4 363 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 SCG3Q8WXD2 468 aaKnown RBP11.97□□□□□ -0.49
BRCA1-225ENST00000586385 CASKIN2Q8WXE0 1202 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 USP7Q93009 1102 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 PMEPA1Q969W9 287 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 WDR92Q96MX6 357 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 TMEM74Q96NL1 305 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 SEMA6CQ9H3T2 930 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 DAAM1Q9Y4D1 1078 aa11.97□□□□□ -0.49
BRCA1-225ENST00000586385 WASH4PA8MWX3 477 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 TMX2-CTNND1H3BSU7 103 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 J3KR12 359 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 B4GAT1O43505 415 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 GFPT2O94808 682 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 UNGP13051 313 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-225ENST00000586385 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-225ENST00000586385 GLB1P16278 677 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 EPHB2P29323 1055 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms