RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 MYLKQ15746 1914 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 hCG_1818297A0A087WSY0 165 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 C16orf96A6NNT2 1141 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 MATN3O15232 486 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 KRT10P13645 584 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 NEK3P51956 506 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 COPS2P61201 443 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 PPP2R5EQ16537 467 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 MARC1Q5VT66 337 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 TIGD7Q6NT04 549 aaPredicted RBP25.1■■□□□ 1.61
TSEN54-209ENST00000583454 PARS2Q7L3T8 475 aaKnown RBP25.1■■□□□ 1.61
TSEN54-209ENST00000583454 PEX26Q7Z412 305 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 PGBD5Q8N414 524 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 HCAR2Q8TDS4 363 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 HDAC11Q96DB2 347 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 KLHL32Q96NJ5 620 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 OLFM3Q96PB7 478 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 TUBGCP5Q96RT8 1024 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 DKK4Q9UBT3 224 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 FTSJ1Q9UET6 329 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 AMFRQ9UKV5 643 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 HEY1Q9Y5J3 304 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 CAPN6Q9Y6Q1 641 aa25.1■■□□□ 1.61
TSEN54-209ENST00000583454 URB1O60287 2271 aaKnown RBP25.1■■□□□ 1.61
TSEN54-209ENST00000583454 TRPM6Q9BX84 2022 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3DA0A087WVF3 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3IA0A087WXS9 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3EA0A087X179 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3KA0A087X1G2 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3FA6NER0 549 aaPredicted RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3LB9A6J9 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3HP0C7X1 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ADRB3P13945 408 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 CR2P20023 1033 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 EPHA8P29322 1005 aaPredicted RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 NR2C2P49116 596 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ADCY2Q08462 1091 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ZNF235Q14590 738 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 INAVAQ3KP66 663 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3GQ6DHY5 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3CQ6IPX1 549 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 NAPEPLDQ6IQ20 393 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 NEK5Q6P3R8 708 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 KANSL1Q7Z3B3 1105 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 SPATS2Q86XZ4 545 aaKnown RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 TBC1D3Q8IZP1 549 aaPredicted RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 BBS5Q8N3I7 341 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ALG3Q92685 438 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ANP32BQ92688 251 aaKnown RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ZNF641Q96N77 438 aaPredicted RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ZNF830Q96NB3 372 aaPredicted RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 MGME1Q9BQP7 344 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 SUV39H2Q9H5I1 410 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 PREBQ9HCU5 417 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 GDF3Q9NR23 364 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 GUCA1BQ9UMX6 200 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 ANKRD36A6QL64 1941 aa25.09■■□□□ 1.61
TSEN54-209ENST00000583454 FASNP49327 2511 aaKnown RBP25.09■■□□□ 1.61
TSEN54-209ENST00000583454 FAM149AA5PLN7 773 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 MIF4GDA9UHW6 222 aaKnown RBP25.08■■□□□ 1.61
TSEN54-209ENST00000583454 TLR4O00206 839 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 CST8O60676 142 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 MMP13P45452 471 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 RWDD2BP57060 319 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 AP1S1P61966 158 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 DYNLT1P63172 113 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 PPIDQ08752 370 aaKnown RBP25.08■■□□□ 1.61
TSEN54-209ENST00000583454 PDK1Q15118 436 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 FBXL19Q6PCT2 694 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 NPNTQ6UXI9 565 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 TRIM69Q86WT6 500 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 GALNT15Q8N3T1 639 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 RAB7BQ96AH8 199 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 SKA1Q96BD8 255 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 NSMCE3Q96MG7 304 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 EFR3BQ9Y2G0 817 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 BPTFQ12830 3046 aa25.08■■□□□ 1.61
TSEN54-209ENST00000583454 TSPAN11A1L157 253 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 AP1G1O43747 822 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 PIGNO95427 931 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 TGM2P21980 687 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 PTPN7P35236 360 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 RXRGP48443 463 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 SCNN1BP51168 640 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 LLGL1Q15334 1064 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 KAZNQ674X7 775 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 DHRS13Q6UX07 377 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 CCDC50Q8IVM0 306 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 CCDC13Q8IYE1 715 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 MFSD2AQ8NA29 543 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 CCNYQ8ND76 341 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 UBE2Q2Q8WVN8 375 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 NUDCD1Q96RS6 583 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 LGMNQ99538 433 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 BRD8Q9H0E9 1235 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 ATP13A3Q9H7F0 1226 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 ERVMER34-1Q9H9K5 563 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 AMACRQ9UHK6 382 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 FADS3Q9Y5Q0 445 aa25.07■■□□□ 1.6
TSEN54-209ENST00000583454 FTCDO95954 541 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms