RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SDHBP21912 280 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 CD38P28907 300 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 EPHA8P29322 1005 aaPredicted RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 SERPINB6P35237 376 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 MAGEA1P43355 309 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 NOP2P46087 812 aaKnown RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 DNA2P51530 1060 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 VAV2P52735 878 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PFN3P60673 137 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 MAXP61244 160 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PPIDQ08752 370 aaKnown RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 NIPAL4Q0D2K0 466 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PTPRRQ15256 657 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 TMEM52BQ4KMG9 183 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 KIAA1161Q6NSJ0 714 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PSAPL1Q6NUJ1 521 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 NPNTQ6UXI9 565 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 KYAT3Q6YP21 454 aaKnown RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 SRLQ86TD4 932 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 IQCHQ86VS3 1027 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 NAXDQ8IW45 347 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 CBARPQ8N350 705 aaPredicted RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 ATPAF2Q8N5M1 289 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 MFSD2AQ8NA29 543 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 DEFB124Q8NES8 71 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 OR13H1Q8NG92 308 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 HCAR2Q8TDS4 363 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 SAP25Q8TEE9 199 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 GANCQ8TET4 914 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 ASB12Q8WXK4 309 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 ALG3Q92685 438 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 KLK6Q92876 244 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 RAB7BQ96AH8 199 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 CENPTQ96BT3 561 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PPP1R16AQ96I34 528 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 SERAC1Q96JX3 654 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 LENG8Q96PV6 779 aaPredicted RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 MCCC1Q96RQ3 725 aaPredicted RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 NUDCD1Q96RS6 583 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 TUBGCP5Q96RT8 1024 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 IL12RB2Q99665 862 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 MYOCQ99972 504 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 GORASP1Q9BQQ3 440 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 DESI2Q9BSY9 194 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 GTPBP2Q9BX10 602 aaKnown RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 CALN1Q9BXU9 219 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 GAREM1Q9H706 876 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 SP110Q9HB58 689 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 NOD2Q9HC29 1040 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PCDH12Q9NPG4 1184 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 KLF15Q9UIH9 416 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PCOLCE2Q9UKZ9 415 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 HPCAL4Q9UM19 191 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PCDHB9Q9Y5E1 797 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 PCDHGB2Q9Y5G2 931 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 ALG6Q9Y672 507 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 CAPN6Q9Y6Q1 641 aa8.76□□□□□ -1.01
SMG6-210ENST00000572205 ARHGEF17Q96PE2 2063 aaPredicted RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 GOLGA4Q13439 2230 aaKnown RBP8.76□□□□□ -1.01
SMG6-210ENST00000572205 CHD6Q8TD26 2715 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 hCG_1818297A0A087WSY0 165 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3DA0A087WVF3 549 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3IA0A087WXS9 549 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3EA0A087X179 549 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3KA0A087X1G2 549 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 LY6G6EA0A0G2JKS1 128 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 LRRD1A4D1F6 860 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3FA6NER0 549 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 IGLON5A6NGN9 336 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3LB9A6J9 549 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 PRAMEF26H0Y7S4 382 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 SH3BP5O60239 455 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 PALMO75781 387 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 CER1O95813 267 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TOP3BO95985 862 aaKnown RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 KRT1P04264 644 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 SYPP08247 313 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3HP0C7X1 549 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 HNRNPA2B1P22626 353 aaKnown RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 CTNNA1P35221 906 aaKnown RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 NUDT1P36639 197 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 SLC1A1P43005 524 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 RECQLP46063 649 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 RXRGP48443 463 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 PEX5P50542 639 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 CLDN2P57739 230 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 AP1S1P61966 158 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 IFI35P80217 286 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 CCZ1BP86790 482 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 CCZ1P86791 482 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 SEMG2Q02383 582 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 SFSWAPQ12872 951 aaKnown RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 SLC14A1Q13336 389 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 KRT81Q14533 505 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 PRKD1Q15139 912 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 HADHQ16836 314 aaKnown RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 UGP2Q16851 508 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 SETMARQ53H47 684 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 N4BP2L1Q5TBK1 243 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3GQ6DHY5 549 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms