RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 MSH6P52701 1360 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 KCNJ18B7U540 433 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 H7C1Q1 480 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 INO80B-WBP1J3KQ70 363 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 SNAP23O00161 211 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 RGS12O14924 1447 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 REC8O95072 547 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 ADAP00813 363 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 SERPINC1P01008 464 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 HLA-DQA2P01906 255 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 EIF2S1P05198 315 aaKnown RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 CSH1P0DML2 217 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 CSH2P0DML3 217 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 AKR1A1P14550 325 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 FMO4P31512 558 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 ACSL1P33121 698 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 PPARGP37231 505 aaPredicted RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 ARL1P40616 181 aaPredicted RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 SKIV2L2P42285 1042 aaKnown RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 SOX2P48431 317 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 EFNA5P52803 228 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 C21orf58P58505 322 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 OLR1P78380 273 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 IFI35P80217 286 aaPredicted RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 RHAGQ02094 409 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 CHAF1BQ13112 559 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 TAF7Q15545 349 aaPredicted RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 KRT24Q2M2I5 525 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 CYP20A1Q6UW02 462 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 PRSS45Q7RTY3 260 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 SLC46A3Q7Z3Q1 461 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 SZRD1Q7Z422 152 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 KLBQ86Z14 1044 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 C11orf65Q8NCR3 313 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 CADM4Q8NFZ8 388 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 OR52N4Q8NGI2 321 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 SCFD2Q8WU76 684 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 FAM120BQ96EK7 910 aaKnown RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 P2RY11Q96G91 374 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 NAF1Q96HR8 494 aaKnown RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 WDFY2Q96P53 400 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 TM2D2Q9BX73 214 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 FRMD8Q9BZ67 464 aaPredicted RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 GLIS2Q9BZE0 524 aaPredicted RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 CXorf56Q9H5V9 222 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 POLR1BQ9H9Y6 1135 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 ADGRL3Q9HAR2 1447 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 MLXIPLQ9NP71 852 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 SNTG1Q9NSN8 517 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 EHD2Q9NZN4 543 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 ATP10DQ9P241 1426 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 TLK1Q9UKI8 766 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 INTS6Q9UL03 887 aaKnown RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 MKLN1Q9UL63 735 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 ICKQ9UPZ9 632 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 TNFSF13BQ9Y275 285 aa3.91□□□□□ -1.78
UBR1-211ENST00000569971 CHD2O14647 1828 aaKnown RBP3.91□□□□□ -1.78
UBR1-211ENST00000569971 FAM208AQ9UK61 1670 aaKnown RBP3.9□□□□□ -1.78
UBR1-211ENST00000569971 NCAPD2Q15021 1401 aa3.9□□□□□ -1.78
UBR1-211ENST00000569971 NCOA3Q9Y6Q9 1424 aa3.9□□□□□ -1.78
UBR1-211ENST00000569971 LTN1O94822 1766 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 ARHGAP10A1A4S6 786 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 CXorf65A6NEN9 183 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 MYO1GB0I1T2 1018 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 SMIM22K7EJ46 135 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 LIASO43766 372 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 HNRNPCL1O60812 293 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 TSPAN9O75954 239 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 BEST1O76090 585 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 JTBO76095 146 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 IL1AP01583 271 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 HOXB7P09629 217 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 ST6GAL1P15907 406 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 MCCP23508 829 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 GARSP41250 739 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 KRTAP10-11P60412 298 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 TEFQ10587 303 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 MTA1Q13330 715 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 RABEP1Q15276 862 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 RPE65Q16518 533 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 GSTA3Q16772 222 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 CCDC96Q2M329 555 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 PLK5Q496M5 336 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 PLEKHO1Q53GL0 409 aaPredicted RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 FAM171A1Q5VUB5 890 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 TMEM268Q5VZI3 342 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 ARMC3Q5W041 872 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 KLHL35Q6PF15 583 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 NCEH1Q6PIU2 408 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 IL20RBQ6UXL0 311 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 GRASPQ7Z6J2 395 aaPredicted RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 AMIGO2Q86SJ2 522 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 GPAT4Q86UL3 456 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 FAM160B2Q86V87 743 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 ADGRG3Q86Y34 549 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 UEVLDQ8IX04 471 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 CCDC105Q8IYK2 499 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 C17orf53Q8N3J3 647 aaPredicted RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 PAQR4Q8N4S7 273 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms