RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ADAP00813 363 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 FESP07332 822 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ALDOCP09972 364 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 IRF1P10914 325 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ADRA1DP25100 572 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 TYK2P29597 1187 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC8A1P32418 973 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 IL15P40933 162 aaPredicted RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF81P51508 661 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SUOXP51687 545 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 CASP9P55211 416 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC26A5P58743 744 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 YPEL5P62699 121 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 CYP4A11Q02928 519 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 GFPT1Q06210 699 aaPredicted RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 TEFQ10587 303 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 MRPL28Q13084 256 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 BMPR2Q13873 1038 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 KCNC3Q14003 757 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF273Q14593 569 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 PDK1Q15118 436 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 RNPS1Q15287 305 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 NAB2Q15742 525 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SNAPC1Q16533 368 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 HFEQ30201 348 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 TMEM211Q6ICI0 200 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 HMBOX1Q6NT76 420 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 IL20RBQ6UXL0 311 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 RGS9BPQ6ZS82 235 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ARHGEF18Q6ZSZ5 1173 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 KCTD9Q7L273 389 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 PARS2Q7L3T8 475 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 TMPRSS6Q8IU80 811 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 Q8NA96 180 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 KDM1BQ8NB78 822 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 NHLRC2Q8NBF2 726 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 HJURPQ8NCD3 748 aaPredicted RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SETD9Q8NE22 299 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SRFBP1Q8NEF9 429 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 OR56A1Q8NGH5 318 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 OR52L2PQ8NGH6 319 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 PSMA8Q8TAA3 256 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 GDPD5Q8WTR4 605 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ZFAND2BQ8WV99 257 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ARHGEF26Q96DR7 871 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 AJUBAQ96IF1 538 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 NEK1Q96PY6 1258 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 OR2A14Q96R47 310 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 RUFY1Q96T51 708 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 NEU1Q99519 415 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SCNM1Q9BWG6 230 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 TRIM7Q9C029 511 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 TRIM6Q9C030 488 aaPredicted RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SCAND2PQ9GZW5 306 aaPredicted RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 VPS33BQ9H267 617 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 DPH5Q9H2P9 285 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 RWDD1Q9H446 243 aaPredicted RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 CNOT10Q9H9A5 744 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC28A3Q9HAS3 691 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 FANCFQ9NPI8 374 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ENTPD7Q9NQZ7 604 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 IARS2Q9NSE4 1012 aaKnown RBP3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 KCTD5Q9NXV2 234 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 PSD3Q9NYI0 1048 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 RNF181Q9P0P0 153 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 ABI3Q9P2A4 366 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 IL19Q9UHD0 177 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 DHDHQ9UQ10 334 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 CMAHPQ9Y471 501 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 PCDHGA5Q9Y5G8 931 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 PCDHGA1Q9Y5H4 931 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 LIPGQ9Y5X9 500 aa3.41□□□□□ -1.86
HERPUD1-211ENST00000566550 CYP3A7-CYP3A51PA0A087WV96 503 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 GPR75-ASB3A0A0A6YYF3 556 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A1B0GTW7 788 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A1W2PRG0 241 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 A1L4Q6 167 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ZAR1LA6NP61 321 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 A8MVJ9 347 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 USP17L23D6RBM5 183 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 AP4M1O00189 453 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC33A1O00400 549 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 RTN2O75298 545 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CELF2O95319 508 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 IL1AP01583 271 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 KLKB1P03952 638 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 GBAP04062 536 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 MMP2P08253 660 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SRCP12931 536 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC2A4P14672 509 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CYP3A7P24462 503 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 IGFBP6P24592 240 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 AZGP1P25311 298 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 TNFRSF8P28908 595 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 HOXA11P31270 313 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 GJC1P36383 396 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 LIPAP38571 399 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 AGTR2P50052 363 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC37A1P57057 533 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms