RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 RD3Q7Z3Z2 195 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 SPRED1Q7Z699 444 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 ZSCAN30Q86W11 494 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 EFCAB3Q8N7B9 438 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 ATP6V0D2Q8N8Y2 350 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 GALNT11Q8NCW6 608 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 DENND6BQ8NEG7 585 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 ZNF397Q8NF99 534 aaPredicted RBP16.11■□□□□ 0.17
RNF40-205ENST00000563909 ZNF606Q8WXB4 792 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 ASB12Q8WXK4 309 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 PMEPA1Q969W9 287 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 CENPTQ96BT3 561 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 TAAR9Q96RI9 348 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 ST7Q9NRC1 585 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 CUEDC1Q9NWM3 386 aaPredicted RBP16.11■□□□□ 0.17
RNF40-205ENST00000563909 GGT7Q9UJ14 662 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 A0A1W2PQJ5 194 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 TSPAN6O43657 245 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 GFPT2O94808 682 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 CALCAP01258 141 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 GLB1P16278 677 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 HK3P52790 923 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 TRIM14Q14142 442 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 MEA1Q16626 185 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 LINGO4Q6UY18 593 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 VPS36Q86VN1 386 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 GKN2Q86XP6 184 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 VSTM4Q8IW00 320 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 TSACCQ96A04 125 aaPredicted RBP16.1■□□□□ 0.17
RNF40-205ENST00000563909 SLC45A3Q96JT2 553 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 C2orf49Q9BVC5 232 aaPredicted RBP16.1■□□□□ 0.17
RNF40-205ENST00000563909 TRIM62Q9BVG3 475 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 TTYH3Q9C0H2 523 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 PRDM8Q9NQV8 689 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.1■□□□□ 0.17
RNF40-205ENST00000563909 PCDHGA3Q9Y5H0 932 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 WASF2Q9Y6W5 498 aa16.1■□□□□ 0.17
RNF40-205ENST00000563909 CELSR1Q9NYQ6 3014 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 EFCAB7A8K855 629 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 K7EM74 188 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 TRUB2O95900 331 aaKnown RBP16.09■□□□□ 0.17
RNF40-205ENST00000563909 FGF3P11487 239 aaPredicted RBP16.09■□□□□ 0.17
RNF40-205ENST00000563909 CYP11B1P15538 503 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 FERP16591 822 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 KRT9P35527 623 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 CDC20Q12834 499 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 ARHGEF7Q14155 803 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 MAP9Q49MG5 647 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 EFHC2Q5JST6 749 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 CERCAMQ5T4B2 595 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 PARS2Q7L3T8 475 aaKnown RBP16.09■□□□□ 0.17
RNF40-205ENST00000563909 BEND5Q7L4P6 421 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 SLC47A2Q86VL8 602 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 RCBTB1Q8NDN9 531 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 PSMB7Q99436 277 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 GPN2Q9H9Y4 310 aaPredicted RBP16.09■□□□□ 0.17
RNF40-205ENST00000563909 RDH14Q9HBH5 336 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 ACP6Q9NPH0 428 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 VPS51Q9UID3 782 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 VANGL2Q9ULK5 521 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 CAPN11Q9UMQ6 739 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 ZFHX3Q15911 3703 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 MED13Q9UHV7 2174 aa16.09■□□□□ 0.17
RNF40-205ENST00000563909 DDAH2O95865 285 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 TPM1P09493 284 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
RNF40-205ENST00000563909 IGFALSP35858 605 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 GPD2P43304 727 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 RPL34P49207 117 aaKnown RBP16.08■□□□□ 0.16
RNF40-205ENST00000563909 ZNF75DP51815 510 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 ZBED6P86452 979 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 AUHQ13825 339 aaKnown RBP16.08■□□□□ 0.16
RNF40-205ENST00000563909 C22orf39Q6P5X5 142 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 PIM3Q86V86 326 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 ZNF677Q86XU0 584 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 GPR156Q8NFN8 814 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 CPLX3Q8WVH0 158 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 MRFAP1L1Q96HT8 127 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 PDCL3Q9H2J4 239 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 LRIT1Q9P2V4 623 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 ITM2BQ9Y287 266 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 TBC1D30Q9Y2I9 924 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 LUC7L2Q9Y383 392 aaKnown RBP16.08■□□□□ 0.16
RNF40-205ENST00000563909 B3GALT1Q9Y5Z6 326 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 PDZD2O15018 2839 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 ADGRG4Q8IZF6 3080 aa16.08■□□□□ 0.16
RNF40-205ENST00000563909 LRRC53A6NM62 1247 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 TTLL8A6PVC2 850 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 RAD1O60671 282 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 CLDN11O75508 207 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 CPNE6O95741 557 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 CLDN1O95832 211 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 IGLV3-25P01717 112 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 PNLIPP16233 465 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 ACADSBP45954 432 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 DNA2P51530 1060 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 CLCN6P51797 869 aa16.07■□□□□ 0.16
RNF40-205ENST00000563909 PITX1P78337 314 aaPredicted RBP16.07■□□□□ 0.16
RNF40-205ENST00000563909 ALG11Q2TAA5 492 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms