RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 ACP1P24666 158 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 ARL4AP40617 200 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 ZNF135P52742 658 aaPredicted RBP14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 TAS2R40P59535 323 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 RALGDSQ12967 914 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 ZNF211Q13398 564 aaPredicted RBP14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 WSCD2Q2TBF2 565 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 KCTD16Q68DU8 428 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 PARGQ86W56 976 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 FAM174AQ8TBP5 190 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 FAM71BQ8TC56 605 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 CXorf40AQ8TE69 158 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 FUBP1Q96AE4 644 aaKnown RBP14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 ZNF641Q96N77 438 aaPredicted RBP14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 PSKH2Q96QS6 385 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 TUBGCP5Q96RT8 1024 aa14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 ZFC3H1O60293 1989 aaKnown RBP14.12□□□□□ -0.15
TNFAIP2-207ENST00000560562 TRABD2BA6NFA1 517 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 K7ESM1 405 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 MFSD11O43934 449 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 CR2P20023 1033 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 CDH6P55285 790 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 LBRQ14739 615 aaKnown RBP14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 SLC18A3Q16572 532 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 HES3Q5TGS1 186 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 TMCO4Q5TGY1 634 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 SPECC1LQ69YQ0 1117 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 BRAT1Q6PJG6 821 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 TMCO3Q6UWJ1 677 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 DCP2Q8IU60 420 aaKnown RBP14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 VSTM4Q8IW00 320 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 GALNT15Q8N3T1 639 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 HCAR2Q8TDS4 363 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 CHP1Q99653 195 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 ATP13A3Q9H7F0 1226 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 ATP8A1Q9Y2Q0 1164 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.11□□□□□ -0.158e-9■■■■■ 27.1
TNFAIP2-207ENST00000560562 PTPRQQ9UMZ3 2332 aa14.11□□□□□ -0.15
TNFAIP2-207ENST00000560562 UNC13CQ8NB66 2214 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 MYO1FO00160 1098 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 SCAMP1O15126 338 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 GCATO75600 419 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 CELA2BP08218 269 aaPredicted RBP14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 C1SP09871 688 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 JUNDP17535 347 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 SERPINA4P29622 427 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 GJC1P36383 396 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 LIG3P49916 1009 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 SCNN1BP51168 640 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 HNRNPKP61978 463 aaKnown RBP eCLIP14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 NSUN2Q08J23 767 aaKnown RBP eCLIP14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 ELP6Q0PNE2 266 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 DPYSL3Q14195 570 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 RFTN1Q14699 578 aaPredicted RBP14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 GRM3Q14832 879 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 PTPRRQ15256 657 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 TMPRSS12Q86WS5 348 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 PELI3Q8N2H9 469 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 LZTR1Q8N653 840 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 SPC24Q8NBT2 197 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 PCDH19Q8TAB3 1148 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 APOLD1Q96LR9 279 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 KCNF1Q9H3M0 494 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 NLGN3Q9NZ94 848 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 SEPT3Q9UH03 358 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 CACNA1GO43497 2377 aa14.1□□□□□ -0.15
TNFAIP2-207ENST00000560562 CASC3O15234 703 aaKnown RBP14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 PROSCO94903 275 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 MAP3K6O95382 1288 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 XPAP23025 273 aaPredicted RBP14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 MSNP26038 577 aaKnown RBP14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 SUOXP51687 545 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 ADKP55263 362 aaKnown RBP14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 MAXP61244 160 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 INSM1Q01101 510 aaPredicted RBP14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 BCL2L1Q07817 233 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 CYP4F3Q08477 520 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 IHHQ14623 411 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 NCBP2-AS2Q69YL0 99 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 PLA2G15Q8NCC3 412 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 OR8K1Q8NGG5 319 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 LRRN4Q8WUT4 740 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 ZNF599Q96NL3 588 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 MGME1Q9BQP7 344 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 LRRC61Q9BV99 259 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 CLPBQ9H078 707 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 CCDC86Q9H6F5 360 aaKnown RBP14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 NOD2Q9HC29 1040 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 SPTLC3Q9NUV7 552 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 CTTNBP2NLQ9P2B4 639 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 PCDHGC4Q9Y5F7 938 aa14.09□□□□□ -0.15
TNFAIP2-207ENST00000560562 A8MX80 341 aa14.08□□□□□ -0.15
TNFAIP2-207ENST00000560562 AQP9O43315 295 aa14.08□□□□□ -0.15
TNFAIP2-207ENST00000560562 HTRA2O43464 458 aaPredicted RBP14.08□□□□□ -0.15
TNFAIP2-207ENST00000560562 MFAP3LO75121 409 aa14.08□□□□□ -0.15
TNFAIP2-207ENST00000560562 CKMT1AP12532 417 aa14.08□□□□□ -0.15
TNFAIP2-207ENST00000560562 SSR1P43307 286 aaKnown RBP14.08□□□□□ -0.15
TNFAIP2-207ENST00000560562 AP1S1P61966 158 aa14.08□□□□□ -0.15
TNFAIP2-207ENST00000560562 TRAF2Q12933 501 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms