RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SKIDA1Q1XH10 827 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 TNFAIP8L3Q5GJ75 292 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 ATXN7L2Q5T6C5 722 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 UBAP2Q5T6F2 1119 aaKnown RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 LGSNQ5TDP6 509 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 PDPK2PQ6A1A2 396 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 CAPN12Q6ZSI9 719 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 MARK2Q7KZI7 788 aaKnown RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 LMNTD2Q8IXW0 634 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 HCAR2Q8TDS4 363 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 EPS8L3Q8TE67 593 aaKnown RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 FRS2Q8WU20 508 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 DNASE1L2Q92874 299 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 ZNF669Q96BR6 464 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 CERS2Q96G23 380 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 MYO19Q96H55 970 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 NSMCE3Q96MG7 304 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 PAFAH2Q99487 392 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 DHRS4Q9BTZ2 278 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 RPP25Q9BUL9 199 aaKnown RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 OSBPL1AQ9BXW6 950 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 TNKS2Q9H2K2 1166 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 SUV39H2Q9H5I1 410 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 PLAC1Q9HBJ0 212 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 EURLQ9NYK6 297 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 EVLQ9UI08 416 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 ZNF180Q9UJW8 692 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 PHTF1Q9UMS5 762 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 CHKBQ9Y259 395 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 PPIL1Q9Y3C6 166 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 STARD13Q9Y3M8 1113 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 IQANK1A0A1B0GTG1 560 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 ZCWPW2A0A1B0GU75 182 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 TBC1D3BA6NDS4 549 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 C2orf81A6NN90 581 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 C2CD4DB7Z1M9 353 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 POC1B-GALNT4F8VUJ3 575 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 LDB2O43679 373 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 RNF40O75150 1001 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 GJB3O75712 270 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 KAT7O95251 611 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 INHBAP08476 426 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PDHA1P08559 390 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 HNRNPLP14866 589 aaKnown RBP eCLIP8.66□□□□□ -1.023e-7■■■■□ 23.3
TRAF3-209ENST00000560463 GLULP15104 373 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PSMA3P25788 255 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 CNTFP26441 200 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 NMBRP28336 390 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 GCAP28676 217 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 SERPINB9P50453 376 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 CCNHP51946 323 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 EPHB1P54762 984 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 ACVR1Q04771 509 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 KDSRQ06136 332 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 MGAT5Q09328 741 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 ILF2Q12905 390 aaKnown RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 SEPT6Q14141 434 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 GALNT3Q14435 633 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 TAF1AQ15573 450 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PTPRNQ16849 979 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 LEXMQ3ZCV2 418 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 TSTD2Q5T7W7 516 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 KIAA0930Q6ICG6 404 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 GDPD4Q6W3E5 623 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 DPY19L3Q6ZPD9 716 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 TAOK1Q7L7X3 1001 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 GLT6D1Q7Z4J2 308 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 KCNMB4Q86W47 210 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 SLC26A11Q86WA9 606 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 RALGPS2Q86X27 583 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 CAMK1DQ8IU85 385 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 CTAGE3PQ8IX95 158 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 RYBPQ8N488 228 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 OR2A12Q8NGT7 310 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 CALML6Q8TD86 181 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 STYXQ8WUJ0 223 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 CYB5D2Q8WUJ1 264 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PDCD6IPQ8WUM4 868 aaKnown RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 SLC44A1Q8WWI5 657 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PTPRN2Q92932 1015 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 ECHDC3Q96DC8 303 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 MFSD3Q96ES6 412 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 MSANTD3Q96H12 275 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 GUCD1Q96NT3 240 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 FCRL3Q96P31 734 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 HEPHQ9BQS7 1158 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 CENPHQ9H3R5 247 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 C8orf33Q9H7E9 229 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 KCNK12Q9HB15 430 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 MAGEE1Q9HCI5 957 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 TREX1Q9NSU2 369 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRAF3-209ENST00000560463 SENP1Q9P0U3 644 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 ZFATQ9P243 1243 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 SUN2Q9UH99 717 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PCDHB9Q9Y5E1 797 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 ACTL7BQ9Y614 415 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PRUNE2Q8WUY3 3088 aa8.66□□□□□ -1.02
TRAF3-209ENST00000560463 PLXND1Q9Y4D7 1925 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms