RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TAF11Q15544 211 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 CDC37Q16543 378 aaPredicted RBP3.89□□□□□ -1.79
SPG11-218ENST00000559754 CFAP58Q5T655 872 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 MFSD4BQ5TF39 518 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 TBC1D9BQ66K14 1250 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 HAUS3Q68CZ6 603 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 ACAD10Q6JQN1 1059 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 TMCO3Q6UWJ1 677 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 TBC1D22AQ8WUA7 517 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 ST8SIA4Q92187 359 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 IGSF21Q96ID5 467 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 COG8Q96MW5 612 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 TWNKQ96RR1 684 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 LHPPQ9H008 270 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 DDX31Q9H8H2 851 aaKnown RBP3.89□□□□□ -1.79
SPG11-218ENST00000559754 NOD2Q9HC29 1040 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 ARHGAP26Q9UNA1 814 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 A0A1B0GVM2 712 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 LINC01553A4QN01 128 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 KDM4EB2RXH2 506 aaPredicted RBP3.88□□□□□ -1.79
SPG11-218ENST00000559754 B4DLN1 442 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 FAM157AC9JC47 383 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 DOK2O60496 412 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 KRT38O76015 456 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 CAMTA2O94983 1202 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 SNRNP70P08621 437 aaKnown RBP3.88□□□□□ -1.79
SPG11-218ENST00000559754 ITGB8P26012 769 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 CALRP27797 417 aaKnown RBP3.88□□□□□ -1.79
SPG11-218ENST00000559754 PRKAA2P54646 552 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 ARF3P61204 181 aaPredicted RBP3.88□□□□□ -1.79
SPG11-218ENST00000559754 ARF1P84077 181 aaKnown RBP3.88□□□□□ -1.79
SPG11-218ENST00000559754 ADORA2A-AS1P86434 159 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.88□□□□□ -1.79
SPG11-218ENST00000559754 ST3GAL1Q11201 340 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 PSMD6Q15008 389 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 WBP2NLQ6ICG8 309 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.88□□□□□ -1.79
SPG11-218ENST00000559754 ENOSF1Q7L5Y1 443 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 KRT74Q7RTS7 529 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 TMEM57Q8N5G2 664 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 USP38Q8NB14 1042 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 NR4A3Q92570 626 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 ZUFSPQ96AP4 578 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 TXNDC15Q96J42 360 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 SLITRK1Q96PX8 696 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 PPP1R10Q96QC0 940 aaKnown RBP3.88□□□□□ -1.79
SPG11-218ENST00000559754 GPR63Q9BZJ6 419 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 GHITMQ9H3K2 345 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 RETREG1Q9H6L5 497 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 KCNG2Q9UJ96 466 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 TBX20Q9UMR3 447 aa3.88□□□□□ -1.79
SPG11-218ENST00000559754 RSF1Q96T23 1441 aaPredicted RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 IGLV5-52A0A0A0MRZ9 124 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 TARSL2A2RTX5 802 aaKnown RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 SYNDIG1LA6NDD5 238 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 CHL1O00533 1208 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 AHCYL1O43865 530 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 KRT36O76013 467 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 CNPP09543 421 aaKnown RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 CSF1P09603 554 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 MTNR1AP48039 350 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 PEX5P50542 639 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 KRT83P78385 493 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 ZBED6P86452 979 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 EEF1A2Q05639 463 aaKnown RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 TRAF3Q13114 568 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 CUL4AQ13619 759 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 IL13RA2Q14627 380 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 ANKRD1Q15327 319 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 BAK1Q16611 211 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 AP5B1Q2VPB7 878 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 GFI1BQ5VTD9 330 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 NAA35Q5VZE5 725 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 RPAP2Q8IXW5 612 aaPredicted RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 ATOH1Q92858 354 aaPredicted RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 ZMAT2Q96NC0 199 aaKnown RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 NPLQ9BXD5 320 aaPredicted RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 ATP8A2Q9NTI2 1148 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 OCIAD1Q9NX40 245 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 NFKBIL1Q9UBC1 381 aaPredicted RBP3.87□□□□□ -1.79
SPG11-218ENST00000559754 VPS28Q9UK41 221 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 PAM16Q9Y3D7 125 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 CLDN16Q9Y5I7 305 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 CYP46A1Q9Y6A2 500 aa3.87□□□□□ -1.79
SPG11-218ENST00000559754 A0A0U1RQJ8 604 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 PABPN1LA6NDY0 278 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 SRRM3A6NNA2 597 aaPredicted RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 C17orf100A8MU93 164 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 TSPAN3O60637 253 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 DKC1O60832 514 aaKnown RBP eCLIP3.86□□□□□ -1.79
SPG11-218ENST00000559754 SCGB1D1O95968 90 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 SERPINC1P01008 464 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 HSP90AB1P08238 724 aaKnown RBP3.86□□□□□ -1.79
SPG11-218ENST00000559754 HNRNPA1P09651 372 aaKnown RBP eCLIP3.86□□□□□ -1.79
SPG11-218ENST00000559754 GLULP15104 373 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 AKR1B1P15121 316 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 RXRAP19793 462 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 MYF6P23409 242 aa3.86□□□□□ -1.79
SPG11-218ENST00000559754 DCTDP32321 178 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms