RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SAYSD1Q9NPB0 183 aa3.29□□□□□ -1.88
SCFD1-218ENST00000556256 OR6C3Q9NZP0 311 aa3.29□□□□□ -1.88
SCFD1-218ENST00000556256 PGAP2Q9UHJ9 254 aa3.29□□□□□ -1.88
SCFD1-218ENST00000556256 GJD2Q9UKL4 321 aa3.29□□□□□ -1.88
SCFD1-218ENST00000556256 VDAC3Q9Y277 283 aa3.29□□□□□ -1.88
SCFD1-218ENST00000556256 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-218ENST00000556256 CCDC189A1A4V9 331 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 HEXIM1O94992 359 aaKnown RBP3.28□□□□□ -1.88
SCFD1-218ENST00000556256 PRSS1P07477 247 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 GPR12P47775 334 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 PRKAA2P54646 552 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 DRG2P55039 364 aaKnown RBP3.28□□□□□ -1.88
SCFD1-218ENST00000556256 DSCR10P59022 87 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 ECT2LQ008S8 904 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 LPIN1Q14693 890 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 TAF5Q15542 800 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 TIGD6Q17RP2 521 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 FBXO47Q5MNV8 452 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 AADACL2Q6P093 401 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 CYP26C1Q6V0L0 522 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 SCN4BQ8IWT1 228 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 SMAP1Q8IYB5 467 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-218ENST00000556256 CADM4Q8NFZ8 388 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 TANKQ92844 425 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 RILPL2Q969X0 211 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 EVI5LQ96CN4 794 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 LGALS12Q96DT0 336 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 G6PC2Q9NQR9 355 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 LIN7CQ9NUP9 197 aaKnown RBP3.28□□□□□ -1.88
SCFD1-218ENST00000556256 SIX4Q9UIU6 781 aa3.28□□□□□ -1.88
SCFD1-218ENST00000556256 C19orf53Q9UNZ5 99 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-218ENST00000556256 A0A096LPK6 155 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 A0A1W2PS18 150 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 LILRA5A6NI73 299 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 FAM90A20PA6NIJ5 464 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 H0Y3Z8 333 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 IRAK2O43187 625 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 CYP21A2P08686 494 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 SRCP12931 536 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 LYL1P12980 280 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 MYF6P23409 242 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 YWHAQP27348 245 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 FAM27E3Q08E93 113 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 BIRC3Q13489 604 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 SMAD1Q15797 465 aaKnown RBP3.27□□□□□ -1.89
SCFD1-218ENST00000556256 GXYLT1Q4G148 440 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 DCAF6Q58WW2 860 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 ZNF354CQ86Y25 554 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 ANKRD18AQ8IVF6 992 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 CCDC117Q8IWD4 279 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-218ENST00000556256 MB21D2Q8IYB1 491 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-218ENST00000556256 SCAIQ8N9R8 606 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 ADAD2Q8NCV1 583 aaKnown RBP3.27□□□□□ -1.89
SCFD1-218ENST00000556256 ATOH8Q96SQ7 321 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 TAAR2Q9P1P5 351 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 KIF17Q9P2E2 1029 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 SLCO3A1Q9UIG8 710 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 FEM1BQ9UK73 627 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 KCNS2Q9ULS6 477 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 PRSS21Q9Y6M0 314 aa3.27□□□□□ -1.89
SCFD1-218ENST00000556256 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 EFCAB8A8MWE9 144 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 TK1P04183 234 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 CD53P19397 219 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 SKIV2L2P42285 1042 aaKnown RBP3.26□□□□□ -1.89
SCFD1-218ENST00000556256 PPM1FP49593 454 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-218ENST00000556256 CUL4BQ13620 913 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 DCTN1Q14203 1278 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 GALNTL6Q49A17 601 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 HSP90AB4PQ58FF6 505 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 DGAT2L7PQ6IED9 249 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 NFE4Q86UQ8 179 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 FTSJ3Q8IY81 847 aaKnown RBP3.26□□□□□ -1.89
SCFD1-218ENST00000556256 SRBD1Q8N5C6 995 aaKnown RBP3.26□□□□□ -1.89
SCFD1-218ENST00000556256 ZNF248Q8NDW4 579 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 OR4N2Q8NGD1 307 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 OR6Y1Q8NGX8 325 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 SLC2A12Q8TD20 617 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 HERVK_113Q902F9 699 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 UBXN10Q96LJ8 280 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 TRAPPC9Q96Q05 1148 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 FAM167BQ9BTA0 163 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 MMTAG2Q9BU76 263 aaKnown RBP3.26□□□□□ -1.89
SCFD1-218ENST00000556256 ELAC1Q9H777 363 aaKnown RBP3.26□□□□□ -1.89
SCFD1-218ENST00000556256 ACAD9Q9H845 621 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 WDR6Q9NNW5 1121 aaKnown RBP3.26□□□□□ -1.89
SCFD1-218ENST00000556256 NOX4Q9NPH5 578 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 RASSF1Q9NS23 344 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 SLC7A10Q9NS82 523 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 ABCF3Q9NUQ8 709 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 GRHL1Q9NZI5 618 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 NDUFAF4Q9P032 175 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 UPB1Q9UBR1 384 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 SLC9A2Q9UBY0 812 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 KLQ9UEF7 1012 aa3.26□□□□□ -1.89
SCFD1-218ENST00000556256 HMX3A6NHT5 357 aa3.25□□□□□ -1.89
SCFD1-218ENST00000556256 PMS2P5A8MQ11 134 aa3.25□□□□□ -1.89
SCFD1-218ENST00000556256 KRTAP16-1A8MUX0 517 aa3.25□□□□□ -1.89
SCFD1-218ENST00000556256 FAM157AC9JC47 383 aa3.25□□□□□ -1.89
SCFD1-218ENST00000556256 NCAM2O15394 837 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms