RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SRP72O76094 671 aaKnown RBP12.44□□□□□ -0.42
HDAC7-230ENST00000552960 MT-CYBP00156 380 aaPredicted RBP12.44□□□□□ -0.42
HDAC7-230ENST00000552960 ASGR1P07306 291 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 EEF1B2P24534 225 aaKnown RBP12.44□□□□□ -0.42
HDAC7-230ENST00000552960 DPYSQ14117 519 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 OGFOD2Q6N063 350 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 HMBOX1Q6NT76 420 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 HFE2Q6ZVN8 426 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 CARM1Q86X55 608 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 SPPL2CQ8IUH8 684 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 CPSF7Q8N684 471 aaKnown RBP12.44□□□□□ -0.42
HDAC7-230ENST00000552960 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
HDAC7-230ENST00000552960 PIGVQ9NUD9 493 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 IGSF9Q9P2J2 1179 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 CROTQ9UKG9 612 aa12.44□□□□□ -0.42
HDAC7-230ENST00000552960 DUSP11O75319 330 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CHRNA1P02708 482 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 GABRB3P28472 473 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 MAGEA12P43365 314 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 FCGRTP55899 365 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 C1QTNF8P60827 252 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TXNL4AP83876 142 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 PLCL1Q15111 1095 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 KCNA10Q16322 511 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TWF2Q6IBS0 349 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 RYBPQ8N488 228 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 ANKRD52Q8NB46 1076 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CENPIQ92674 756 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 GFM2Q969S9 779 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 LRCH3Q96II8 777 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 MED10Q9BTT4 135 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 MLPHQ9BV36 600 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 RHOJQ9H4E5 214 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 VRTNQ9H8Y1 702 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 AGO3Q9H9G7 860 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CXorf21Q9HAI6 301 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 PRDM16Q9HAZ2 1276 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TNFRSF12AQ9NP84 129 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TBC1D23Q9NUY8 699 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 GIMAP2Q9UG22 337 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 VPS28Q9UK41 221 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SMIM28A0A1B0GU29 152 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TRIM43BA6NCK2 446 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 J3QRK9 145 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 FBP2O00757 339 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CASP2P42575 452 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CSE1LP55060 971 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SULT2A1Q06520 285 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 NSUN2Q08J23 767 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CAPRIN1Q14444 709 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 FAM83EQ2M2I3 478 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SLC25A52Q3SY17 297 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 PAN2Q504Q3 1202 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 ESRP1Q6NXG1 681 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SIX6OS1Q8N1H7 587 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TMEM151AQ8N4L1 468 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 CD99L2Q8TCZ2 262 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 STYXQ8WUJ0 223 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 HEXDCQ8WVB3 486 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 FBXL8Q96CD0 374 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 FBXL20Q96IG2 436 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SLC45A3Q96JT2 553 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 PIF1Q9H611 641 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 RMI1Q9H9A7 625 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 POLR1BQ9H9Y6 1135 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TRMT13Q9NUP7 481 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SMOXQ9NWM0 555 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SLC8A2Q9UPR5 921 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 IPPQ9Y573 584 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 A0A087WXM4 84 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 NR5A2O00482 541 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 ATE1O95260 518 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SNRPB2P08579 225 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 HSPA8P11142 646 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 TAS2R39P59534 338 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 BNIP3Q12983 259 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 RWDD4Q6NW29 188 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 BBS5Q8N3I7 341 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 NPWQ8N729 165 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 RNF34Q969K3 372 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 GPR22Q99680 433 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 PAAF1Q9BRP4 392 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 C1QTNF1Q9BXJ1 281 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 IL22Q9GZX6 179 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 NAA50Q9GZZ1 169 aaKnown RBP12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SELENONQ9NZV5 590 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 SLC2A6Q9UGQ3 507 aa12.43□□□□□ -0.42
HDAC7-230ENST00000552960 ZNF638Q14966 1978 aaKnown RBP12.42□□□□□ -0.42
HDAC7-230ENST00000552960 RANBP2P49792 3224 aaKnown RBP12.42□□□□□ -0.42
HDAC7-230ENST00000552960 BPTFQ12830 3046 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ZNF236Q9UL36 1845 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 SH3PXD2BA1X283 911 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 DFFAO00273 331 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 KCNA5P22460 613 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 VARSP26640 1264 aaKnown RBP12.42□□□□□ -0.42
HDAC7-230ENST00000552960 SLC7A1P30825 629 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ALDH3B2P48448 385 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms