RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ATXN1LP0C7T5 689 aaKnown RBP21.21■□□□□ 0.99
CACNB3-210ENST00000548874 GRIA4P48058 902 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 VPS41P49754 854 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 GPS1Q13098 491 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 QPCTQ16769 361 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 LRRC73Q5JTD7 316 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 DNTTIP2Q5QJE6 756 aaKnown RBP21.21■□□□□ 0.99
CACNB3-210ENST00000548874 RANBP10Q6VN20 620 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 PAF1Q8N7H5 531 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 PDCD7Q8N8D1 485 aaKnown RBP21.21■□□□□ 0.99
CACNB3-210ENST00000548874 CEP112Q8N8E3 955 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 LPCAT1Q8NF37 534 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 CCHCR1Q8TD31 782 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 IFT43Q96FT9 208 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 TOE1Q96GM8 510 aaKnown RBP21.21■□□□□ 0.99
CACNB3-210ENST00000548874 SPACA7Q96KW9 195 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 ADGRE3Q9BY15 652 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 KDM4CQ9H3R0 1056 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 LRRC40Q9H9A6 602 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 PCDH12Q9NPG4 1184 aa21.21■□□□□ 0.99
CACNB3-210ENST00000548874 EIF2B3Q9NR50 452 aaKnown RBP21.21■□□□□ 0.99
CACNB3-210ENST00000548874 MBD1Q9UIS9 605 aaPredicted RBP21.21■□□□□ 0.99
CACNB3-210ENST00000548874 A0A0J9YYE9 177 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 CTAGE15A4D2H0 777 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 ANKRD66B4E2M5 251 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 RIOK3O14730 519 aaKnown RBP21.2■□□□□ 0.98
CACNB3-210ENST00000548874 LILRB5O75023 590 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 TRBC1P01850 177 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 CTAGE8P0CG41 777 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 ITIH2P19823 946 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 HLA-DPA1P20036 260 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 XPAP23025 273 aaPredicted RBP21.2■□□□□ 0.98
CACNB3-210ENST00000548874 MAGEA6P43360 314 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 GALNT3Q14435 633 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 KDELC2Q7Z4H8 507 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 CTAGE6Q86UF2 777 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 CTAGE4Q8IX94 777 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 OR14C36Q8NHC7 312 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 GAB3Q8WWW8 586 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 SCRN2Q96FV2 425 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 FICDQ9BVA6 458 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 FSD1LQ9BXM9 530 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 INVSQ9Y283 1065 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 PCDHGA2Q9Y5H1 932 aa21.2■□□□□ 0.98
CACNB3-210ENST00000548874 FAM187AA6NFU0 413 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 RAD51CO43502 376 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 SUN1O94901 812 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 SEMA4FO95754 770 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 AGTP01019 485 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 PRKCGP05129 697 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 IVDP26440 423 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 CNR2P34972 360 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 MMP12P39900 470 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 CHRNA4P43681 627 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 EPHB1P54762 984 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 BASP1P80723 227 aaKnown RBP21.19■□□□□ 0.98
CACNB3-210ENST00000548874 ELP6Q0PNE2 266 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 OLIG2Q13516 323 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 SLC1A5Q15758 541 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 DPPA4Q7L190 304 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 MAATS1Q7Z4T9 603 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 MMGT1Q8N4V1 131 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 PRSS33Q8NF86 280 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 OR2T34Q8NGX1 318 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 SMIM14Q96QK8 99 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 LYSMD1Q96S90 227 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 TBL1YQ9BQ87 522 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 TRIM51Q9BSJ1 452 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 ARNT2Q9HBZ2 717 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 PREBQ9HCU5 417 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 GGT7Q9UJ14 662 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 ITM2BQ9Y287 266 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 NUMA1Q14980 2115 aa21.19■□□□□ 0.98
CACNB3-210ENST00000548874 CAPN8A6NHC0 703 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 E7EVH7 732 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 HRO43593 1189 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 TSPAN6O43657 245 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 RPP40O75818 363 aaKnown RBP21.18■□□□□ 0.98
CACNB3-210ENST00000548874 FGF1P05230 155 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 APRTP07741 180 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 CTPS1P17812 591 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 BCKDHBP21953 392 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 RALGDSQ12967 914 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 SRSF5Q13243 272 aaKnown RBP21.18■□□□□ 0.98
CACNB3-210ENST00000548874 SPARCL1Q14515 664 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 KCNJ11Q14654 390 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 TMEM52BQ4KMG9 183 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 SIRPB2Q5JXA9 342 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 NAPEPLDQ6IQ20 393 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 DENND5AQ6IQ26 1287 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 ERAP2Q6P179 960 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 NEK5Q6P3R8 708 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 SLC36A4Q6YBV0 504 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 USP45Q70EL2 814 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 NDUFAF2Q8N183 169 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 CPT1BQ92523 772 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 LRRC45Q96CN5 670 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 RMDN1Q96DB5 314 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 CARD6Q9BX69 1037 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 PCED1AQ9H1Q7 454 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms