RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ETNK2Q9NVF9 386 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 APOBEC3BQ9UH17 382 aaKnown RBP13.45□□□□□ -0.26
CPSF6-204ENST00000547486 OR1A2Q9Y585 309 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
CPSF6-204ENST00000547486 LMO7DNF2Z398 122 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 TOR1BO14657 336 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 USP12O75317 370 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 CSO75390 466 aaKnown RBP13.44□□□□□ -0.26
CPSF6-204ENST00000547486 PEX11BO96011 259 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 GM2AP17900 193 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 AMPD1P23109 780 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 MMP12P39900 470 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 PBX1P40424 430 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 PEX5P50542 639 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 PPARDQ03181 441 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 IL10RBQ08334 325 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 NSUN2Q08J23 767 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPSF6-204ENST00000547486 SLC10A7Q0GE19 358 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 RALGDSQ12967 914 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 AGERQ15109 404 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 NR0B2Q15466 257 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 ALG11Q2TAA5 492 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 FIGNQ5HY92 759 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 PERM1Q5SV97 790 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 TXNRD3NBQ6F5E7 133 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 ERAP2Q6P179 960 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 BRAT1Q6PJG6 821 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 LUZP1Q86V48 1076 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 SLC35F3Q8IY50 421 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 SNIP1Q8TAD8 396 aaKnown RBP13.44□□□□□ -0.26
CPSF6-204ENST00000547486 FUBP1Q96AE4 644 aaKnown RBP13.44□□□□□ -0.26
CPSF6-204ENST00000547486 ECHDC3Q96DC8 303 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 BTBD6Q96KE9 485 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 DEPDC7Q96QD5 511 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 APOOQ9BUR5 198 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
CPSF6-204ENST00000547486 SLC13A1Q9BZW2 595 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 CBX8Q9HC52 389 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 ATP8A1Q9Y2Q0 1164 aa13.44□□□□□ -0.26
CPSF6-204ENST00000547486 MYLKQ15746 1914 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 A8MX80 341 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 TRAFD1O14545 582 aaPredicted RBP13.43□□□□□ -0.26
CPSF6-204ENST00000547486 LZTS3O60299 673 aaPredicted RBP13.43□□□□□ -0.26
CPSF6-204ENST00000547486 PCCBP05166 539 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 ANXA6P08133 673 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 MYBL1P10243 752 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 PCK1P35558 622 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 ABCG1P45844 678 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 SCNN1BP51168 640 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 HK3P52790 923 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 FANCCQ00597 558 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 RFTN1Q14699 578 aaPredicted RBP13.43□□□□□ -0.26
CPSF6-204ENST00000547486 TCEA2Q15560 299 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 DPYSL2Q16555 572 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 ISXQ2M1V0 245 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 TBC1D25Q3MII6 688 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 C6orf132Q5T0Z8 1188 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 CFAP58Q5T655 872 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 ENPP7Q6UWV6 458 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 RD3Q7Z3Z2 195 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 HID1Q8IV36 788 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 PGBD5Q8N414 524 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 TBATAQ96M53 351 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 PSKH2Q96QS6 385 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 THAP2Q9H0W7 228 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 ATP13A3Q9H7F0 1226 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 ZWILCHQ9H900 591 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 SP110Q9HB58 689 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 MRPL47Q9HD33 250 aaKnown RBP13.43□□□□□ -0.26
CPSF6-204ENST00000547486 NCKIPSDQ9NZQ3 722 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 SCINQ9Y6U3 715 aa13.43□□□□□ -0.26
CPSF6-204ENST00000547486 SYCE3A1L190 88 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 CFAP69A5D8W1 941 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 TMEM110-MUSTN1A8MSY1 372 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 RECQL5O94762 991 aaPredicted RBP13.42□□□□□ -0.26
CPSF6-204ENST00000547486 RARAP10276 462 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 SERPINA4P29622 427 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 ACTN2P35609 894 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 SRP54P61011 504 aaKnown RBP13.42□□□□□ -0.26
CPSF6-204ENST00000547486 BCL2L1Q07817 233 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
CPSF6-204ENST00000547486 NFATC4Q14934 902 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 ACAP1Q15027 740 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 BOLA3Q53S33 107 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 LIPIQ6XZB0 460 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 PELI3Q8N2H9 469 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 CPLX3Q8WVH0 158 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 HSPH1Q92598 858 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 TRIM11Q96F44 468 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 CSPG4P5Q96PW8 444 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF6-204ENST00000547486 PRORYQ9H606 182 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF6-204ENST00000547486 EVA1BQ9NVM1 165 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 PADI4Q9UM07 663 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 PCDHGC4Q9Y5F7 938 aa13.42□□□□□ -0.26
CPSF6-204ENST00000547486 BPTFQ12830 3046 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 A0A087X0T9 212 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms