RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 PDCD4Q53EL6 469 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 KCTD11Q693B1 232 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 TAC4Q86UU9 113 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 TMEM199Q8N511 208 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHFR-223ENST00000544268 DQX1Q8TE96 717 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 ZNF689Q96CS4 500 aaPredicted RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 FUBP3Q96I24 572 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHFR-223ENST00000544268 RBBP8Q99708 897 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 RABL2BQ9UNT1 228 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 TDRKHQ9Y2W6 561 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 PCDHB5Q9Y5E4 795 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 GOLGA8QA0A0J9YX86 632 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 GOLGA8OA6NCC3 632 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 GOLGA8NF8WBI6 632 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 TK2O00142 265 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 MSI1O43347 362 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 KLHL41O60662 606 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 EFEMP2O95967 443 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 NCF2P19878 526 aaPredicted RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 SLC9B1Q4ZJI4 515 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 RWDD4Q6NW29 188 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 CYS1Q717R9 158 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 OTOP2Q7RTS6 562 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 PATL1Q86TB9 770 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 ZSCAN18Q8TBC5 510 aaPredicted RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 JADE3Q92613 823 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 CCDC124Q96CT7 223 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 IGSF21Q96ID5 467 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 GRIP2Q9C0E4 1043 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 ATXN3LQ9H3M9 355 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 WDCPQ9H6R7 721 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 RC3H2Q9HBD1 1191 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 C20orf96Q9NUD7 363 aaPredicted RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 TMED5Q9Y3A6 229 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 AK5Q9Y6K8 562 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 A0A096LPK6 155 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 G3V2L1 256 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 DFFAO00273 331 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 CBFA2T3O75081 653 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 SOAT2O75908 522 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 GARSP41250 739 aaKnown RBP15.11■□□□□ 0.01
CHFR-223ENST00000544268 TLR1Q15399 786 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 TRIP10Q15642 601 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 RNF19BQ6ZMZ0 732 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 ANKS3Q6ZW76 656 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 AHI1Q8N157 1196 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 SCML4Q8N228 414 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 HIPK4Q8NE63 616 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 SLC26A7Q8TE54 656 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 CRISPLD1Q9H336 500 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 Q9H521 79 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 ZNF696Q9H7X3 374 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 ZNHIT2Q9UHR6 403 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 SOX13Q9UN79 622 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 ARHGAP42A6NI28 874 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 ZBTB14O43829 449 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 CCNT2O60583 730 aaKnown RBP15.11■□□□□ 0.01
CHFR-223ENST00000544268 VNN2O95498 520 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 SERPINE1P05121 402 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 ATP5BP06576 529 aaKnown RBP15.11■□□□□ 0.01
CHFR-223ENST00000544268 CNTFP26441 200 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 EPHB1P54762 984 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 ABCE1P61221 599 aaKnown RBP15.11■□□□□ 0.01
CHFR-223ENST00000544268 FOXD4Q12950 439 aaPredicted RBP15.11■□□□□ 0.01
CHFR-223ENST00000544268 SMUG1Q53HV7 270 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 TMEM135Q86UB9 458 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 WDR75Q8IWA0 830 aaKnown RBP15.11■□□□□ 0.01
CHFR-223ENST00000544268 GPR152Q8TDT2 470 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 MCOLN1Q9GZU1 580 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 DCDC2Q9UHG0 476 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 SFMBT1Q9UHJ3 866 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 SLC39A10Q9ULF5 831 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 FAF1Q9UNN5 650 aaPredicted RBP15.11■□□□□ 0.01
CHFR-223ENST00000544268 SLC27A5Q9Y2P5 690 aa15.11■□□□□ 0.01
CHFR-223ENST00000544268 MTMR11A4FU01 709 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 HTR3EA5X5Y0 456 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 ADAM12O43184 909 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 DCXO43602 365 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 TNFAIP8O95379 198 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 C2P06681 752 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 RPL17P18621 184 aaKnown RBP15.1■□□□□ 0.01
CHFR-223ENST00000544268 GABRB3P28472 473 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 RAB15P59190 212 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 GPR17Q13304 367 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 CCNIQ14094 377 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 GRM3Q14832 879 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 C16orf59Q7L2K0 433 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 UBE2Q1Q7Z7E8 422 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 KCNMB4Q86W47 210 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 ERI1Q8IV48 349 aaKnown RBP15.1■□□□□ 0.01
CHFR-223ENST00000544268 DENND6AQ8IWF6 608 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 RNF34Q969K3 372 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 OR52B2Q96RD2 323 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 CPNE1Q99829 537 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 GBA3Q9H227 469 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 WDR55Q9H6Y2 383 aaPredicted RBP15.1■□□□□ 0.01
CHFR-223ENST00000544268 LRRC40Q9H9A6 602 aa15.1■□□□□ 0.01
CHFR-223ENST00000544268 PLGRKTQ9HBL7 147 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms