RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DCNP07585 359 aaKnown RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 ZSCAN5DPP0CG00 497 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 ETS1P14921 441 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 TPSB2P20231 275 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 NFKBIAP25963 317 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 ITGB7P26010 798 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 CD86P42081 329 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 CXCL12P48061 93 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 POLR2LP62875 67 aaKnown RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 MTAPQ13126 283 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 TPSAB1Q15661 275 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 CST6Q15828 149 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 ARMC12Q5T9G4 340 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 ARMC3Q5W041 872 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 USP30Q70CQ3 517 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 KBTBD6Q86V97 674 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 HOOK3Q86VS8 718 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 RASSF3Q86WH2 238 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 SEC14L1Q92503 715 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 RAB7BQ96AH8 199 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 OXNAD1Q96HP4 312 aaPredicted RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 SRPK1Q96SB4 655 aaKnown RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 RBM15Q96T37 977 aaKnown RBP eCLIP12.61□□□□□ -0.39
COPB1-208ENST00000532088 ERP44Q9BS26 406 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 MTG2Q9H4K7 406 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 LRRC40Q9H9A6 602 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 ETNK1Q9HBU6 452 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 RAB6BQ9NRW1 208 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 EBF1Q9UH73 591 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 ASIC3Q9UHC3 531 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 UTP11Q9Y3A2 253 aaKnown RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 PPIL1Q9Y3C6 166 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 RAI2Q9Y5P3 530 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 NCOR1O75376 2440 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 TCRBV21S2A2A0A5A6 115 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 DNALI1O14645 258 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 PI15O43692 258 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 BNIP3LO60238 219 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 PGLSO95336 258 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 APBB3O95704 486 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 MT-CYBP00156 380 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 IGLV3-19P01714 112 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 HLA-DPA1P20036 260 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 IVDP26440 423 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 ADRA1AP35348 466 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 ADCY8P40145 1251 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 GRIA4P48058 902 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 WNT3AP56704 352 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 CDK18Q07002 472 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 TRAF2Q12933 501 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 GPS1Q13098 491 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 IHHQ14623 411 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 OXLD1Q5BKU9 147 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 DUPD1Q68J44 220 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 LINC00523Q86TU6 105 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 TMPRSS6Q8IU80 811 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 MMAAQ8IVH4 418 aaKnown RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 NOA1Q8NC60 698 aaKnown RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 TSTD1Q8NFU3 115 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 OR6K2Q8NGY2 324 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 PRCCQ92733 491 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 SIPA1Q96FS4 1042 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 NSMCE3Q96MG7 304 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 TRIB3Q96RU7 358 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 MLPHQ9BV36 600 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 COL25A1Q9BXS0 654 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 ADGRE3Q9BY15 652 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 FRMD8Q9BZ67 464 aaPredicted RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 FAM129AQ9BZQ8 928 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 MKRN2Q9H000 416 aaKnown RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 PABPC3Q9H361 631 aaKnown RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 ARNT2Q9HBZ2 717 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 DYRK4Q9NR20 520 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 FZD4Q9ULV1 537 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 TPX2Q9ULW0 747 aaKnown RBP12.6□□□□□ -0.39
COPB1-208ENST00000532088 PHTF1Q9UMS5 762 aa12.6□□□□□ -0.39
COPB1-208ENST00000532088 C16orf96A6NNT2 1141 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 EFCAB8A8MWE9 144 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 GJB3O75712 270 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 PIGNO95427 931 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 NDST3O95803 873 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 PRLP01236 227 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 IL1BP01584 269 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 DNTTP04053 509 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 FGF1P05230 155 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 UGT2B4P06133 528 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 GABRG2P18507 467 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 ITIH2P19823 946 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 SLC8A1P32418 973 aa12.59□□□□□ -0.39
COPB1-208ENST00000532088 NEK3P51956 506 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms