RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SLC1A5Q15758 541 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 ANKRD20A4Q4UJ75 823 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 PCID2Q5JVF3 399 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 RETSATQ6NUM9 610 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 SLC26A11Q86WA9 606 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
TTC39A-216ENST00000530004 PPHLN1Q8NEY8 458 aaKnown RBP14.52□□□□□ -0.09
TTC39A-216ENST00000530004 CYB5D2Q8WUJ1 264 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 UCMAQ8WVF2 138 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 SORCS1Q8WY21 1168 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 MFSD3Q96ES6 412 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 IFT43Q96FT9 208 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 KIFC1Q9BW19 673 aa14.52□□□□□ -0.09
TTC39A-216ENST00000530004 KIAA1549LQ6ZVL6 1849 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 ANTXRLA6NF34 631 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 INSIG1O15503 277 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 MT-CO1P00395 513 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 CREB1P16220 341 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 CDK18Q07002 472 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 CCINQ13939 588 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 SMAD1Q15797 465 aaKnown RBP14.51□□□□□ -0.09
TTC39A-216ENST00000530004 PTPRNQ16849 979 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 SIRPB2Q5JXA9 342 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 PKN3Q6P5Z2 889 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 TRABD2AQ86V40 505 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 CDKL2Q92772 493 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 CERS2Q96G23 380 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 FEM1CQ96JP0 617 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 RPL10LQ96L21 214 aaKnown RBP14.51□□□□□ -0.09
TTC39A-216ENST00000530004 NUDCD1Q96RS6 583 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 IL1RAPL1Q9NZN1 696 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 HCN2Q9UL51 889 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 NDRG2Q9UN36 371 aaKnown RBP14.51□□□□□ -0.09
TTC39A-216ENST00000530004 ERVW-1Q9UQF0 538 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 HS3ST2Q9Y278 367 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 MRPS17Q9Y2R5 130 aaKnown RBP14.51□□□□□ -0.09
TTC39A-216ENST00000530004 FCF1Q9Y324 198 aaKnown RBP14.51□□□□□ -0.09
TTC39A-216ENST00000530004 TCAF1Q9Y4C2 921 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 FAM169AQ9Y6X4 670 aa14.51□□□□□ -0.09
TTC39A-216ENST00000530004 IQANK1A0A1B0GTG1 560 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ZCWPW2A0A1B0GU75 182 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 KANSL1LA0AUZ9 987 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 CCDC78A2IDD5 438 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 DCXO43602 365 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 UGT1A9O60656 530 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 FAM155BO75949 473 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ATXN1LP0C7T5 689 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ERVK-10P10266 1014 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 CES1P23141 567 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 NMBRP28336 390 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 KIR2DL1P43626 348 aaPredicted RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 STK19P49842 368 aaPredicted RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SERPINH1P50454 418 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 RHOAP61586 193 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 GABPB1Q06547 395 aaPredicted RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SLC20A2Q08357 652 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SIGLEC14Q08ET2 396 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 MGAT5Q09328 741 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SEPT6Q14141 434 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SLC14A2Q15849 920 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 RASSF3Q86WH2 238 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ZNF687Q8N1G0 1237 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 PTCD2Q8WV60 388 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 EDAQ92838 391 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 MYO19Q96H55 970 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 MRGPRX3Q96LB0 322 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 NSMCE3Q96MG7 304 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ZNF778Q96MU6 729 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 CNOT10Q9H9A5 744 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 UGT1A7Q9HAW7 530 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 UGT1A10Q9HAW8 530 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 UGT1A8Q9HAW9 530 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 LTB4R2Q9NPC1 389 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 LHX3Q9UBR4 397 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SLC25A13Q9UJS0 675 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ZNF180Q9UJW8 692 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 PLA2G4CQ9UP65 541 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ACTL7BQ9Y614 415 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 K7ERQ8 282 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SRPRAP08240 638 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 BRAFP15056 766 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 HLA-DPA1P20036 260 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ADRA1DP25100 572 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 TARSP26639 723 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 VASPP50552 380 aaPredicted RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 FRG1Q14331 258 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 GALNT3Q14435 633 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 FBXO43Q4G163 708 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ZNF449Q6P9G9 518 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 MARK2Q7KZI7 788 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 MDM1Q8TC05 714 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 MZB1Q8WU39 189 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 NELL2Q99435 816 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 CAPS2Q9BXY5 557 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 MRM3Q9HC36 420 aaKnown RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SENP1Q9P0U3 644 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 ZFATQ9P243 1243 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SLC17A6Q9P2U8 582 aa14.5□□□□□ -0.09
TTC39A-216ENST00000530004 THAP10Q9P2Z0 257 aaPredicted RBP14.5□□□□□ -0.09
TTC39A-216ENST00000530004 SLCO3A1Q9UIG8 710 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms