RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 INSM1Q01101 510 aaPredicted RBP18.82■□□□□ 0.6
SPIDR-220ENST00000522900 RALGDSQ12967 914 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 TARDBPQ13148 414 aaKnown RBP eCLIP18.82■□□□□ 0.6
SPIDR-220ENST00000522900 ILKQ13418 452 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 KRT81Q14533 505 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 LRRC14Q15048 493 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 SLC18A3Q16572 532 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 ERAP2Q6P179 960 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 FAM71BQ8TC56 605 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 LMX1AQ8TE12 382 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 CHP1Q99653 195 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 C1QTNF7Q9BXJ2 289 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 WDFY3Q8IZQ1 3526 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 CFAP47Q6ZTR5 3102 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 ARID1BQ8NFD5 2236 aaPredicted RBP18.81■□□□□ 0.6
SPIDR-220ENST00000522900 NEMP2A6NFY4 417 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 AQP9O43315 295 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 GCATO75600 419 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 CKMT1AP12532 417 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 ADKP55263 362 aaKnown RBP18.81■□□□□ 0.6
SPIDR-220ENST00000522900 YPEL5P62699 121 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 C1orf61Q13536 156 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 PTK2BQ14289 1009 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 INPP5AQ14642 412 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 DEFB133Q30KQ1 61 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 HS1BP3Q53T59 392 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 VSTM4Q8IW00 320 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 PDCD7Q8N8D1 485 aaKnown RBP18.81■□□□□ 0.6
SPIDR-220ENST00000522900 PLA2G15Q8NCC3 412 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 NOD2Q9HC29 1040 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 PCDHGC4Q9Y5F7 938 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 CSNK1G3Q9Y6M4 447 aa18.81■□□□□ 0.6
SPIDR-220ENST00000522900 H3BM21 787 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 LZTS3O60299 673 aaPredicted RBP18.8■□□□□ 0.6
SPIDR-220ENST00000522900 PROSCO94903 275 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 H2AFZP0C0S5 128 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 ALPPL2P10696 532 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 GM2AP17900 193 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 CR2P20023 1033 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 MAXP61244 160 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 AP1S1P61966 158 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 DPYSL3Q14195 570 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 ZNF235Q14590 738 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 HADHQ16836 314 aaKnown RBP18.8■□□□□ 0.6
SPIDR-220ENST00000522900 LIPIQ6XZB0 460 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 H2AFVQ71UI9 128 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 PHACTR4Q8IZ21 702 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 PAF1Q8N7H5 531 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 FAM181AQ8N9Y4 354 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 PCDH19Q8TAB3 1148 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 CLPBQ9H078 707 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 UVRAGQ9P2Y5 699 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 APOBEC3BQ9UH17 382 aaKnown RBP18.8■□□□□ 0.6
SPIDR-220ENST00000522900 OR1A2Q9Y585 309 aa18.8■□□□□ 0.6
SPIDR-220ENST00000522900 SSU72P8A0A1W2PR75 194 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 TOR1BO14657 336 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 RECQL5O94762 991 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-220ENST00000522900 MAP3K6O95382 1288 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 PCCBP05166 539 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 CELA2BP08218 269 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-220ENST00000522900 HNF1BP35680 557 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 TRIM14Q14142 442 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 AGERQ15109 404 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 PTPRRQ15256 657 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 PRRT3Q5FWE3 981 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 FAXCQ5TGI0 409 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 KCTD16Q68DU8 428 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 NCBP2-AS2Q69YL0 99 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 MACC1Q6ZN28 852 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 DPPA4Q7L190 304 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 ATPAF2Q8N5M1 289 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 KCTD6Q8NC69 237 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 LRRN4Q8WUT4 740 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 BTN2A2Q8WVV5 523 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 CTNNBL1Q8WYA6 563 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-220ENST00000522900 RFFLQ8WZ73 363 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 TSACCQ96A04 125 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-220ENST00000522900 NUDCD1Q96RS6 583 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 MGME1Q9BQP7 344 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 APOOQ9BUR5 198 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 LRRC61Q9BV99 259 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 DUSP23Q9BVJ7 150 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 DEF6Q9H4E7 631 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 SCUBE2Q9NQ36 999 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 ABHD10Q9NUJ1 306 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 SPTLC3Q9NUV7 552 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 RCOR3Q9P2K3 495 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-220ENST00000522900 RAXQ9Y2V3 346 aa18.79■□□□□ 0.6
SPIDR-220ENST00000522900 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.78■□□□□ 0.6
SPIDR-220ENST00000522900 TMEM110-MUSTN1A8MSY1 372 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 HTRA2O43464 458 aaPredicted RBP18.78■□□□□ 0.6
SPIDR-220ENST00000522900 MFSD11O43934 449 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 AKR1B10O60218 316 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 TMEM253P0C7T8 217 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 SERPINB6P35237 376 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 MMP13P45452 471 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 PEX5P50542 639 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 POLR2LP62875 67 aaKnown RBP18.78■□□□□ 0.6
SPIDR-220ENST00000522900 E2F1Q01094 437 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 TRAF2Q12933 501 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms