RNA–Protein interactions for RNA: ENST00000511807.1

UBE2B-208, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-208ENST00000511807 FAM129BQ96TA1 746 aa11.49□□□□□ -0.57
UBE2B-208ENST00000511807 ELF4Q99607 663 aaPredicted RBP11.49□□□□□ -0.57
UBE2B-208ENST00000511807 FEM1AQ9BSK4 669 aa11.49□□□□□ -0.57
UBE2B-208ENST00000511807 C2orf49Q9BVC5 232 aaPredicted RBP11.49□□□□□ -0.57
UBE2B-208ENST00000511807 NOL6Q9H6R4 1146 aaKnown RBP11.49□□□□□ -0.57
UBE2B-208ENST00000511807 ATP13A1Q9HD20 1204 aa11.49□□□□□ -0.57
UBE2B-208ENST00000511807 IPO11Q9UI26 975 aaKnown RBP11.49□□□□□ -0.57
UBE2B-208ENST00000511807 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
UBE2B-208ENST00000511807 ZNF148Q9UQR1 794 aa11.49□□□□□ -0.57
UBE2B-208ENST00000511807 R3HDM2Q9Y2K5 976 aaKnown RBP11.49□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3DA0A087WVF3 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3IA0A087WXS9 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3EA0A087X179 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3KA0A087X1G2 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 CXorf51AA0A1B0GTR3 108 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3FA6NER0 549 aaPredicted RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TRABD2BA6NFA1 517 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 ZSCAN5CA6NGD5 496 aaPredicted RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3LB9A6J9 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 WNT9AO14904 365 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 KDELR3O43731 214 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 STK10O94804 968 aaKnown RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3HP0C7X1 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 FNTAP49354 379 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 CCR5P51681 352 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 ADPRHP54922 357 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 GEMIN4P57678 1058 aaKnown RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TUBB4BP68371 445 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 SULT2A1Q06520 285 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 IL10RBQ08334 325 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 CYP4F3Q08477 520 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 PPIDQ08752 370 aaKnown RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 AP1B1Q10567 949 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 SNX1Q13596 522 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 ELAVL3Q14576 367 aaKnown RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 ACCSLQ4AC99 568 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 SLC45A4Q5BKX6 768 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3GQ6DHY5 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3CQ6IPX1 549 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 CCDC137Q6PK04 289 aaKnown RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 CCDC13Q8IYE1 715 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 TBC1D3Q8IZP1 549 aaPredicted RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 OR7D4Q8NG98 312 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 HNRNPLLQ8WVV9 542 aaKnown RBP11.48□□□□□ -0.57
UBE2B-208ENST00000511807 ATG4AQ8WYN0 398 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 HMCESQ96FZ2 354 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 CARD6Q9BX69 1037 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 SP110Q9HB58 689 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 GDF3Q9NR23 364 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 HAUS2Q9NVX0 235 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 DNPEPQ9ULA0 475 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 SHROOM3Q8TF72 1996 aa11.48□□□□□ -0.57
UBE2B-208ENST00000511807 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 A0A0D9SEW6 157 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 CBX4O00257 560 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 PLK4O00444 970 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 BNIP3LO60238 219 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 MAFKO60675 156 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 NEBLO76041 1014 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 MAP3K6O95382 1288 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 GAS8O95995 478 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 ACTN2P35609 894 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 ACVRL1P37023 503 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 METAP1P53582 386 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 PPP2CBP62714 309 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 PPP2CAP67775 309 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 SLC20A2Q08357 652 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
UBE2B-208ENST00000511807 CCDC70Q6NSX1 233 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 RETSATQ6NUM9 610 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 GSTA5Q7RTV2 222 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 MAATS1Q7Z4T9 603 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 PDZD3Q86UT5 571 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 KLHL7Q8IXQ5 586 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 BBS5Q8N3I7 341 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 DCAF4L2Q8NA75 395 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 OR52K2Q8NGK3 314 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 FATE1Q969F0 183 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 ALG14Q96F25 216 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 CNDP2Q96KP4 475 aaKnown RBP11.47□□□□□ -0.57
UBE2B-208ENST00000511807 CCDC114Q96M63 670 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 ZNF599Q96NL3 588 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 QKIQ96PU8 341 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBE2B-208ENST00000511807 VAT1Q99536 393 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 LGMNQ99538 433 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 RRAGDQ9NQL2 400 aaPredicted RBP11.47□□□□□ -0.57
UBE2B-208ENST00000511807 OR51B4Q9Y5P0 310 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 PKD1L2Q7Z442 2459 aa11.47□□□□□ -0.57
UBE2B-208ENST00000511807 A0A1W2PR77 199 aa11.46□□□□□ -0.57
UBE2B-208ENST00000511807 TLR4O00206 839 aa11.46□□□□□ -0.57
UBE2B-208ENST00000511807 MATN3O15232 486 aa11.46□□□□□ -0.57
UBE2B-208ENST00000511807 PRAMEF11O60813 436 aa11.46□□□□□ -0.57
UBE2B-208ENST00000511807 LDOC1O95751 146 aaPredicted RBP11.46□□□□□ -0.57
UBE2B-208ENST00000511807 RBL1P28749 1068 aa11.46□□□□□ -0.57
UBE2B-208ENST00000511807 MAT2AP31153 395 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms