RNA–Protein interactions for RNA: ENST00000511362.5

ATXN3-211, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-211ENST00000511362 SCLT1Q96NL6 688 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 CRACR2AQ9BSW2 395 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 CHST8Q9H2A9 424 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 SNX15Q9NRS6 342 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 RASSF1Q9NS23 344 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 MRGBPQ9NV56 204 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 WDR35Q9P2L0 1181 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 AFF4Q9UHB7 1163 aaKnown RBP3.19□□□□□ -1.9
ATXN3-211ENST00000511362 DDX20Q9UHI6 824 aaKnown RBP3.19□□□□□ -1.9
ATXN3-211ENST00000511362 MID2Q9UJV3 735 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 RRP7AQ9Y3A4 280 aaKnown RBP3.19□□□□□ -1.9
ATXN3-211ENST00000511362 DGKBQ9Y6T7 804 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 V9GYY5 206 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-211ENST00000511362 PLXNA3P51805 1871 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 GBF1Q92538 1859 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 FRYLO94915 3013 aa3.19□□□□□ -1.9
ATXN3-211ENST00000511362 HELZ2Q9BYK8 2649 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 EP300Q09472 2414 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 RPAP1Q9BWH6 1393 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 MED23Q9ULK4 1368 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 LY6G6EA0A0G2JKS1 128 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KBTBD13C9JR72 458 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 J3KRW8 73 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 M0R3H8 397 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 CLIC1O00299 241 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 TMPRSS11DO60235 418 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KLHL41O60662 606 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ZBED4O75132 1171 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ZNF254O75437 659 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ERLIN1O75477 346 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 STAMBPO95630 424 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 PAHP00439 452 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 SLC4A1P02730 911 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KRT13P13646 458 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 DESP17661 470 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 MT3P25713 68 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 CHMLP26374 656 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 CCND3P30281 292 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 HOXD12P35452 270 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 MTHFRP42898 656 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 MATR3P43243 847 aaKnown RBP eCLIP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 TNNT3P45378 269 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 CPT1AP50416 773 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 YPEL5P62699 121 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 AP2B1P63010 937 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 NUCB2P80303 420 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 CCDC173Q0VFZ6 552 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 PRKG2Q13237 762 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 SLC14A1Q13336 389 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 SLC29A2Q14542 456 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KCNAB1Q14722 419 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 MFSD13AQ14CX5 517 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KIAA0753Q2KHM9 967 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KBTBD12Q3ZCT8 623 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 MINDY4Q4G0A6 757 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 CAVIN4Q5BKX8 364 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 FAM102BQ5T8I3 360 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 INTS11Q5TA45 600 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 RNF220Q5VTB9 566 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 NXNQ6DKJ4 435 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 TATDN1Q6P1N9 297 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 USP49Q70CQ1 688 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 RSRC2Q7L4I2 434 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 MRPL10Q7Z7H8 261 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 RPAP2Q8IXW5 612 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 NKAPQ8N5F7 415 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ANKRD13CQ8N6S4 541 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 RBMXL3Q8N7X1 1067 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 SPERTQ8NA61 448 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 FAM156AQ8NDB6 213 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ACMSDQ8TDX5 336 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 PIGOQ8TEQ8 1089 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 CUL5Q93034 780 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ATP6V1E2Q96A05 226 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 EDC3Q96F86 508 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 THOC1Q96FV9 657 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KAZALD1Q96I82 304 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ZBED3Q96IU2 234 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 RBM14Q96PK6 669 aaKnown RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 TESK2Q96S53 571 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 SH3GL3Q99963 347 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KATNAL1Q9BW62 490 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 TMEM39BQ9GZU3 492 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 FOXP1Q9H334 677 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 STARD7Q9NQZ5 370 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 C1orf112Q9NSG2 853 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 TCP11L1Q9NUJ3 509 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 BLOC1S4Q9NUP1 217 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 DKK4Q9UBT3 224 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 NKX1-2Q9UD57 310 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 GIMAP2Q9UG22 337 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 LAMP5Q9UJQ1 280 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ITGB1BP2Q9UKP3 347 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 RIMKLBQ9ULI2 386 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 PCDHAC2Q9Y5I4 1007 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 USP9XQ93008 2570 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-211ENST00000511362 KMT2EQ8IZD2 1858 aa3.18□□□□□ -1.9
ATXN3-211ENST00000511362 ZBED9Q6R2W3 1325 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms