RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 SLC39A13Q96H72 371 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 PPP1R16AQ96I34 528 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 EPSTI1Q96J88 318 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 IPO9Q96P70 1041 aaKnown RBP9.68□□□□□ -0.86
PTPN20-221ENST00000509599 MDFIQ99750 246 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 LRRC4Q9HBW1 653 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 APOBEC3GQ9HC16 384 aaKnown RBP9.68□□□□□ -0.86
PTPN20-221ENST00000509599 APMAPQ9HDC9 416 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 TMEM9Q9P0T7 183 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 IL36AQ9UHA7 158 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 CROTQ9UKG9 612 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 ITM2BQ9Y287 266 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 DOCK4Q8N1I0 1966 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 CACNA1CQ13936 2221 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 PRRC2AP48634 2157 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 MN1Q10571 1320 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 A6NCN8 305 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 ZSCAN5CA6NGD5 496 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 LRRTM2O43300 516 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 OIP5O43482 229 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 TSPAN6O43657 245 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 PRICKLE3O43900 615 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 IL2RAP01589 272 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 RPN1P04843 607 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 RRM1P23921 792 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 NFKBIAP25963 317 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 L1CAMP32004 1257 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 DLSTP36957 453 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 MAP2K3P46734 347 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 ITGA1P56199 1179 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 MAZP56270 477 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 PER3P56645 1201 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 DAOAP59103 153 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 SRP54P61011 504 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 DLG4P78352 724 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 MC2RQ01718 297 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 CENPCQ03188 943 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 NKAIN2Q5VXU1 208 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 ARHGAP17Q68EM7 881 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 SPECC1LQ69YQ0 1117 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 DPY19L3Q6ZPD9 716 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 PARS2Q7L3T8 475 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 CDH24Q86UP0 819 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 CHSY1Q86X52 802 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 ZNF295-AS1Q8N0V1 137 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 RBMXL3Q8N7X1 1067 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 TP53I13Q8NBR0 393 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 SLC4A11Q8NBS3 891 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 PNPLA2Q96AD5 504 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 CCDC114Q96M63 670 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 CYP3A43Q9HB55 503 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 FN1P02751 2386 aaKnown RBP9.67□□□□□ -0.86
PTPN20-221ENST00000509599 COL6A5A8TX70 2615 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
PTPN20-221ENST00000509599 TCAF2A6NFQ2 919 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 TOR1BO14657 336 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 XPO1O14980 1071 aaKnown RBP9.66□□□□□ -0.86
PTPN20-221ENST00000509599 INPP4BO15327 924 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 SNAP91O60641 907 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
PTPN20-221ENST00000509599 LRCH4O75427 683 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 HLA-DRAP01903 254 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 IRAK1P51617 712 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 CHAF1BQ13112 559 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
PTPN20-221ENST00000509599 MAP7Q14244 749 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 ENPP7Q6UWV6 458 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 CEACAM20Q6UY09 585 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 STXBP4Q6ZWJ1 553 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 EPM2AIP1Q7L775 607 aaPredicted RBP9.66□□□□□ -0.86
PTPN20-221ENST00000509599 TAF8Q7Z7C8 310 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 SCML4Q8N228 414 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 ESX1Q8N693 406 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 ATP11CQ8NB49 1132 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 RNF31Q96EP0 1072 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 PDXPQ96GD0 296 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 PSMB7Q99436 277 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 PRMT1Q99873 361 aaKnown RBP9.66□□□□□ -0.86
PTPN20-221ENST00000509599 TWSG1Q9GZX9 223 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 TNKS2Q9H2K2 1166 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 CNGB3Q9NQW8 809 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 VPS28Q9UK41 221 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 TLR6Q9Y2C9 796 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 PIKFYVEQ9Y2I7 2098 aa9.66□□□□□ -0.86
PTPN20-221ENST00000509599 NSD1Q96L73 2696 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-221ENST00000509599 PIPSLA2A3N6 862 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 DPM1O60762 260 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 KATNA1O75449 491 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 ZNF821O75541 412 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-221ENST00000509599 CREG1O75629 220 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 FYNP06241 537 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 CD1EP15812 388 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 BMP6P22004 513 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 PIK3CAP42336 1068 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 PEX5P50542 639 aa9.65□□□□□ -0.86
PTPN20-221ENST00000509599 RAD23BP54727 409 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms