RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 K7ESM1 405 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 EEF2KO00418 725 aaKnown RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 TSPAN6O43657 245 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 MAGEC1O60732 1142 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 PEX11BO96011 259 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 CSF2P04141 144 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 NME1P15531 152 aaKnown RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 GM2AP17900 193 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 GEMIN4P57678 1058 aaKnown RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 DPYSQ14117 519 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 KLHL40Q2TBA0 621 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 PARP15Q460N3 678 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 INO80DQ53TQ3 878 aaPredicted RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 RFX8Q6ZV50 586 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 TTC7BQ86TV6 843 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 CAMK1DQ8IU85 385 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 PELI3Q8N2H9 469 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 DCBLD1Q8N8Z6 715 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 TSEN2Q8NCE0 465 aaKnown RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 RFFLQ8WZ73 363 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 ZNF653Q96CK0 615 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 CWC15Q9P013 229 aaKnown RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 MYO1AQ9UBC5 1043 aa13.27□□□□□ -0.29
DDX41-204ENST00000504807 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.29
DDX41-204ENST00000504807 PMS2P1A4D2B8 440 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 SCAMP1O15126 338 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 FGF10O15520 208 aaPredicted RBP13.26□□□□□ -0.29
DDX41-204ENST00000504807 TDRD6O60522 2096 aaKnown RBP13.26□□□□□ -0.29
DDX41-204ENST00000504807 IGSF6O95976 241 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 CKMT1AP12532 417 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 AIF1P55008 147 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 KLHL30Q0D2K2 578 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 RALGDSQ12967 914 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 C1orf61Q13536 156 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 PTPRRQ15256 657 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 IRF4Q15306 451 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 SMTNL2Q2TAL5 461 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 DEFB133Q30KQ1 61 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 CDCP2Q5VXM1 449 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 PGBD5Q8N414 524 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 PLA2G15Q8NCC3 412 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 ASB12Q8WXK4 309 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 RAB7BQ96AH8 199 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 ARHGEF26Q96DR7 871 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 OSBPL1AQ9BXW6 950 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 CLPBQ9H078 707 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 ISCUQ9H1K1 167 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 CATSPERBQ9H7T0 1116 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 PCDH12Q9NPG4 1184 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 DKK3Q9UBP4 350 aa13.26□□□□□ -0.29
DDX41-204ENST00000504807 TLN1Q9Y490 2541 aaKnown RBP13.26□□□□□ -0.29
DDX41-204ENST00000504807 ANKRD62A6NC57 917 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
DDX41-204ENST00000504807 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 K7ENP7 123 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 NEMP1O14524 444 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 FPGTO14772 594 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 MT-CO3P00414 261 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 GZMAP12544 262 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 CR2P20023 1033 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 RABIFP47224 123 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 NDST2P52849 883 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 GABREP78334 506 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 FANCCQ00597 558 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 CCDC15Q0P6D6 951 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 SGCGQ13326 291 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 TCEA2Q15560 299 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 WSCD2Q2TBF2 565 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 TMEM52BQ4KMG9 183 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 PPP6R3Q5H9R7 873 aaPredicted RBP13.25□□□□□ -0.29
DDX41-204ENST00000504807 GUSBP11Q6P575 273 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 INO80CQ6PI98 192 aaPredicted RBP13.25□□□□□ -0.29
DDX41-204ENST00000504807 PARGQ86W56 976 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 SFTPA2Q8IWL1 248 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 FNIP1Q8TF40 1166 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 CASKIN2Q8WXE0 1202 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 IFT43Q96FT9 208 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 LRRC61Q9BV99 259 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 CPEB1Q9BZB8 566 aaKnown RBP13.25□□□□□ -0.29
DDX41-204ENST00000504807 DPH1Q9BZG8 443 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 NAT10Q9H0A0 1025 aaKnown RBP13.25□□□□□ -0.29
DDX41-204ENST00000504807 THAP2Q9H0W7 228 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 SEPT3Q9UH03 358 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 NENFQ9UMX5 172 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 LRP4O75096 1905 aa13.25□□□□□ -0.29
DDX41-204ENST00000504807 A0A087X0T9 212 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 DFFAO00273 331 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 SUV39H1O43463 412 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 FAM228BP0C875 321 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 JUNDP17535 347 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 AMPD1P23109 780 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 MMP12P39900 470 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 SLC25A11Q02978 314 aaKnown RBP13.24□□□□□ -0.29
DDX41-204ENST00000504807 SLC10A7Q0GE19 358 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 ILKQ13418 452 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 IHHQ14623 411 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 UGP2Q16851 508 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 FIGNQ5HY92 759 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms