RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 KBTBD13C9JR72 458 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 H0YAE9 185 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 M0R3G1 203 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PLK4O00444 970 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 KLF4O43474 513 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 MED24O75448 989 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 RASAL1O95294 804 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 DLGAP3O95886 979 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 ASNSP08243 561 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM191BP0C7N4 346 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CYP2D6P10635 497 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PCNAP12004 261 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 UNGP13051 313 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 MX2P20592 715 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 EEF1B2P24534 225 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 GJC1P36383 396 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC26A3P40879 764 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 EIF2DP41214 584 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 DPP6P42658 865 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 VEGFBP49765 207 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CYP2J2P51589 502 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 HK2P52789 917 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 MAPK10P53779 464 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CABP4P57796 275 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PSME3P61289 254 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC10A2Q12908 348 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 IKQ13123 557 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 GRIN2CQ14957 1233 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CTF1Q16619 201 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 TYSND1Q2T9J0 566 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PLA2G4EQ3MJ16 856 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 BRMS1LQ5PSV4 323 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PXDC1Q5TGL8 231 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 VWA5B1Q5TIE3 1220 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 METTL2BQ6P1Q9 378 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CYP20A1Q6UW02 462 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 MFSD7Q6UXD7 560 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 SPOCD1Q6ZMY3 1216 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC16A12Q6ZSM3 486 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 C15orf52Q6ZUT6 534 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 POLNQ7Z5Q5 900 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 SNX29P2Q8IUI4 249 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 BRSK2Q8IWQ3 736 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 SLFN12Q8IYM2 578 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CADM2Q8N3J6 435 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 MEIOBQ8N635 442 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM169BQ8N8A8 192 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 POC5Q8NA72 575 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 LEMD2Q8NC56 503 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PSD4Q8NDX1 1056 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM174Q8WUU8 243 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CYGBQ8WWM9 190 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PMEPA1Q969W9 287 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 VCPIP1Q96JH7 1222 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM20AQ96MK3 541 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM74Q96NL1 305 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 DACH2Q96NX9 599 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 ASB2Q96Q27 587 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 IL12RB2Q99665 862 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 GDF15Q99988 308 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM47Q9BQJ4 181 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 FUNDC2Q9BWH2 189 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 C1QTNF7Q9BXJ2 289 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 ZC3H12CQ9C0D7 883 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 NARFLQ9H6Q4 476 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 LRRC40Q9H9A6 602 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 LIN7BQ9HAP6 207 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 MRPL47Q9HD33 250 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 DCP1AQ9NPI6 582 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 NECTIN3Q9NQS3 549 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 POLE4Q9NR33 117 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 AGPAT3Q9NRZ7 376 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 TBC1D22BQ9NU19 505 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CCM2LQ9NUG4 571 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 FBXO28Q9NVF7 368 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 ZDHHC3Q9NYG2 299 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 ADA2Q9NZK5 511 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 DNMT3LQ9UJW3 386 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 CNOT6Q9ULM6 557 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNRF3Q9ULT6 936 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 AP3M1Q9Y2T2 418 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 VWA7Q9Y334 891 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 PCDHB12Q9Y5F1 795 aa4.8□□□□□ -1.64
SNRNP40-206ENST00000489853 NUP188Q5SRE5 1749 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RGPD2P0DJD1 1756 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SCN11AQ9UI33 1791 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 hCG_1818297A0A087WSY0 165 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 HEATR9A2RTY3 570 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 GOLGA8JA6NMD2 632 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 OR5K4A6NMS3 321 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 CXorf49A8MYA2 514 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 PI4K2BG5E9Z4 385 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 STX16-NPEPL1H3BU86 382 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 NDUFA2O43678 99 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 PLIN3O60664 434 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms