RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 TUBGCP5Q96RT8 1024 aa17■□□□□ 0.31
NF1-211ENST00000487476 MKRN2Q9H000 416 aaKnown RBP17■□□□□ 0.31
NF1-211ENST00000487476 CASS4Q9NQ75 786 aa17■□□□□ 0.31
NF1-211ENST00000487476 VGLL3A8MV65 326 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 OPA1O60313 960 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 PGLSO95336 258 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 IL1BP01584 269 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 COPAP53621 1224 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 SLC14A2Q15849 920 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 TTMPQ5BVD1 217 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 CERCAMQ5T4B2 595 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 NAPEPLDQ6IQ20 393 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 TRIM67Q6ZTA4 783 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 CCDC25Q86WR0 208 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 MPP5Q8N3R9 675 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 ZCCHC9Q8N567 271 aaKnown RBP16.99■□□□□ 0.31
NF1-211ENST00000487476 DNAAF3Q8N9W5 541 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 RUFY1Q96T51 708 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 CAPS2Q9BXY5 557 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 KPNA3O00505 521 aaPredicted RBP16.99■□□□□ 0.31
NF1-211ENST00000487476 SEMG2Q02383 582 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 CAV1Q03135 178 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 ARMC12Q5T9G4 340 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 LRRC8BQ6P9F7 803 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 TRMT11Q7Z4G4 463 aaKnown RBP16.99■□□□□ 0.31
NF1-211ENST00000487476 PJA1Q8NG27 643 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 PIP4K2CQ8TBX8 421 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 PIH1D2Q8WWB5 315 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 RMDN1Q96DB5 314 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 MMP17Q9ULZ9 603 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 BPTFQ12830 3046 aa16.99■□□□□ 0.31
NF1-211ENST00000487476 TTC28Q96AY4 2481 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 NCOR1O75376 2440 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 SOCS5O75159 536 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 NDST3O95803 873 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 DCNP07585 359 aaKnown RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 CTPS1P17812 591 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 MAGEA3P43357 314 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 PSMD8P48556 350 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 FASTKD3Q14CZ7 662 aaKnown RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 SKIDA1Q1XH10 827 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 DNAJC21Q5F1R6 531 aaKnown RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 ALS2CLQ60I27 953 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 LINC00523Q86TU6 105 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 EDAQ92838 391 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 ARL8AQ96BM9 186 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 ECHDC3Q96DC8 303 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 ZNF641Q96N77 438 aaPredicted RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 FMO2Q99518 471 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 WDR83Q9BRX9 315 aaKnown RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 ARIH1Q9Y4X5 557 aaPredicted RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 EPOP01588 193 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 MGAT1P26572 445 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 SATB1Q01826 763 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 MSLNQ13421 630 aaPredicted RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 LRRC32Q14392 662 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 E2F5Q15329 346 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 HIF1AQ16665 826 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 QPCTQ16769 361 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 BBS9Q3SYG4 887 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 IGDCC3Q8IVU1 814 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 PAF1Q8N7H5 531 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 TMIEQ8NEW7 156 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 ARRDC3Q96B67 414 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 ZIM3Q96PE6 472 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 NELL2Q99435 816 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 TRIM56Q9BRZ2 755 aaKnown RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 RSPH9Q9H1X1 276 aaPredicted RBP16.98■□□□□ 0.31
NF1-211ENST00000487476 ARNT2Q9HBZ2 717 aa16.98■□□□□ 0.31
NF1-211ENST00000487476 ANKRD66B4E2M5 251 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 EIF3HO15372 352 aaKnown RBP eCLIP16.97■□□□□ 0.31
NF1-211ENST00000487476 PRNPP04156 253 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 ALPIP09923 528 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 GNGT1P63211 74 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 SARNPP82979 210 aaKnown RBP16.97■□□□□ 0.31
NF1-211ENST00000487476 DHX9Q08211 1270 aaKnown RBP16.97■□□□□ 0.31
NF1-211ENST00000487476 SIGLEC14Q08ET2 396 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 CDH17Q12864 832 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 GRM3Q14832 879 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 STARD3Q14849 445 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 CCDC38Q502W7 563 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 EOGTQ5NDL2 527 aa16.97■□□□□ 0.31
NF1-211ENST00000487476 C16orf96A6NNT2 1141 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 A8MX80 341 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 MID1O15344 667 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 DCXO43602 365 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 PI15O43692 258 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 CCT5P48643 541 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 EPHB1P54762 984 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 ARL4CP56559 192 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 PDIA2Q13087 525 aaKnown RBP16.96■□□□□ 0.31
NF1-211ENST00000487476 POU6F1Q14863 301 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 CRY1Q16526 586 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 UBAP2Q5T6F2 1119 aaKnown RBP16.96■□□□□ 0.31
NF1-211ENST00000487476 PARS2Q7L3T8 475 aaKnown RBP16.96■□□□□ 0.31
NF1-211ENST00000487476 ANKMY2Q8IV38 441 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 SYNPOQ8N3V7 929 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 OR2T3Q8NH03 318 aa16.96■□□□□ 0.31
NF1-211ENST00000487476 ADGRE3Q9BY15 652 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms