RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 LRRC8CQ8TDW0 803 aa3.92□□□□□ -1.78
GCFC2-209ENST00000486016 GDPD5Q8WTR4 605 aa3.92□□□□□ -1.78
GCFC2-209ENST00000486016 ERGIC1Q969X5 290 aa3.92□□□□□ -1.78
GCFC2-209ENST00000486016 SLC39A13Q96H72 371 aa3.92□□□□□ -1.78
GCFC2-209ENST00000486016 TRMT61BQ9BVS5 477 aaKnown RBP3.92□□□□□ -1.78
GCFC2-209ENST00000486016 SAYSD1Q9NPB0 183 aa3.92□□□□□ -1.78
GCFC2-209ENST00000486016 SCRT2Q9NQ03 307 aa3.92□□□□□ -1.78
GCFC2-209ENST00000486016 NFE2L3Q9Y4A8 694 aa3.92□□□□□ -1.78
GCFC2-209ENST00000486016 A0A0G2JPF8 293 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 FAM90A7PA6NKC0 464 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 FAM90A22PA8MWA6 464 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 FAM90A12PA8MX19 464 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 FAM90A23PA8MXZ1 464 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 HNRNPCL3B7ZW38 293 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 KLRF2D3W0D1 207 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 HNRNPCL1O60812 293 aaKnown RBP3.91□□□□□ -1.78
GCFC2-209ENST00000486016 HNRNPCL4P0DMR1 293 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 KCNA5P22460 613 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 TIGD6Q17RP2 521 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 ATP13A5Q4VNC0 1218 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 CCDC38Q502W7 563 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 C14orf177Q52M58 125 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 PPP6R3Q5H9R7 873 aaPredicted RBP3.91□□□□□ -1.78
GCFC2-209ENST00000486016 PLEKHA7Q6IQ23 1121 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 C17orf99Q6UX52 265 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 IL20RBQ6UXL0 311 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 WDSUB1Q8N9V3 476 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 TWNKQ96RR1 684 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 PCGF6Q9BYE7 350 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 ZNF696Q9H7X3 374 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 ZNF334Q9HCZ1 680 aaPredicted RBP3.91□□□□□ -1.78
GCFC2-209ENST00000486016 CDC14AQ9UNH5 594 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 TCF19Q9Y242 345 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 DERAQ9Y315 318 aa3.91□□□□□ -1.78
GCFC2-209ENST00000486016 C17orf113A0A1B0GUU1 675 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 A0A1W2PS18 150 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 HSPB2A8KAH6 182 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 SOCS6O14544 535 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 FGF17O60258 216 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 KLK8O60259 260 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 HLA-DOBP13765 273 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 CD53P19397 219 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 BLKP51451 505 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 CLCN3P51790 818 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 LINC01547P58512 204 aaPredicted RBP3.9□□□□□ -1.79
GCFC2-209ENST00000486016 HSPB2Q16082 182 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 TUBB8Q3ZCM7 444 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 FAM122CQ6P4D5 195 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 DSG4Q86SJ6 1040 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 SFR1Q86XK3 245 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 EPHX4Q8IUS5 362 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 CHERPQ8IWX8 916 aaKnown RBP3.9□□□□□ -1.79
GCFC2-209ENST00000486016 RAB40AQ8WXH6 277 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 FBXO17Q96EF6 278 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 TMEM19Q96HH6 336 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 KCNS2Q9ULS6 477 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 VDAC3Q9Y277 283 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 DNAJC16Q9Y2G8 782 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 A3GALT2U3KPV4 340 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 ATXN2Q99700 1313 aaKnown RBP3.9□□□□□ -1.79
GCFC2-209ENST00000486016 TAF1P21675 1872 aa3.9□□□□□ -1.79
GCFC2-209ENST00000486016 B9A039 149 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 PLRG1O43660 514 aaKnown RBP3.89□□□□□ -1.79
GCFC2-209ENST00000486016 EDIL3O43854 480 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 ATP2C2O75185 946 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 TIPRLO75663 272 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 NDUFB4O95168 129 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 AARSP49588 968 aaKnown RBP eCLIP3.89□□□□□ -1.79
GCFC2-209ENST00000486016 SLC20A2Q08357 652 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 GOLGA8FQ08AF8 430 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 CTXN3Q4LDR2 81 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 SYCP2LQ5T4T6 812 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 B3GNT6Q6ZMB0 384 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 FOXRED2Q8IWF2 684 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 CPXM2Q8N436 756 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 PARP16Q8N5Y8 322 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 GJC3Q8NFK1 279 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 CTCFLQ8NI51 663 aaPredicted RBP3.89□□□□□ -1.79
GCFC2-209ENST00000486016 POF1BQ8WVV4 589 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 RILPL2Q969X0 211 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 ZNF501Q96CX3 271 aaPredicted RBP3.89□□□□□ -1.79
GCFC2-209ENST00000486016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.89□□□□□ -1.79
GCFC2-209ENST00000486016 PLCB1Q9NQ66 1216 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 PSAT1Q9Y617 370 aa3.89□□□□□ -1.79
GCFC2-209ENST00000486016 C16orf97H3BN30 126 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 CETPP11597 493 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 ZNF8P17098 575 aaPredicted RBP3.88□□□□□ -1.79
GCFC2-209ENST00000486016 PTPN2P17706 415 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 GPTP24298 496 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 CHATP28329 748 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 TAF6P49848 677 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 ATP12AP54707 1039 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 NR1H2P55055 460 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 CLDN2P57739 230 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 ACTR2P61160 394 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 RELQ04864 619 aaPredicted RBP3.88□□□□□ -1.79
GCFC2-209ENST00000486016 GFRALQ6UXV0 394 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 MOB3CQ70IA8 216 aa3.88□□□□□ -1.79
GCFC2-209ENST00000486016 LURAP1LQ8IV03 231 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms