RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	NCEH1	Q6PIU2	408 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SLC30A9	Q6PML9	568 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SHC4	Q6S5L8	630 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	DHRS13	Q6UX07	377 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	RANBP10	Q6VN20	620 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	IKBIP	Q70UQ0	350 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	TAGAP	Q8N103	731 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	LSMEM1	Q8N8F7	131 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	OR52N4	Q8NGI2	321 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	PIGO	Q8TEQ8	1089 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	JAKMIP2	Q96AA8	810 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	CALML4	Q96GE6	196 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	ADAD1	Q96M93	576 aa	Known RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	MAP7D2	Q96T17	732 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	MPHOSPH8	Q99549	860 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	H2AFJ	Q9BTM1	129 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	MAK16	Q9BXY0	300 aa	Known RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	ITPA	Q9BY32	194 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SLCO5A1	Q9H2Y9	848 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SH2D4A	Q9H788	454 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	TLR8	Q9NR97	1041 aa	Known RBP	4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SMYD2	Q9NRG4	433 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	BABAM1	Q9NWV8	329 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	PEMT	Q9UBM1	199 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	TBC1D29	Q9UFV1	150 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	SNX8	Q9Y5X2	465 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	KCNE2	Q9Y6J6	123 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	PIAS3	Q9Y6X2	628 aa		4.12	□□□□□ -1.75
VPS8-223	ENST00000485024	IQGAP1	P46940	1657 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024		A0A1W2PRG0	241 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	MYO1G	B0I1T2	1018 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	VILL	O15195	856 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	HNRNPCL1	O60812	293 aa	Known RBP	4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	EIF2S1	P05198	315 aa	Known RBP	4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	CD63	P08962	238 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	HOXB5	P09067	269 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	CSH1	P0DML2	217 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	CSH2	P0DML3	217 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	LYL1	P12980	280 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	CYP2J2	P51589	502 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	SLC12A2	P55011	1212 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	CYP4F2	P78329	520 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	OLR1	P78380	273 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	MC1R	Q01726	317 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	CREB5	Q02930	508 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	SLC9B1	Q4ZJI4	515 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	PLEKHS1	Q5SXH7	462 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	FAM171A1	Q5VUB5	890 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	HMBOX1	Q6NT76	420 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	PRSS45	Q7RTY3	260 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	SLC46A3	Q7Z3Q1	461 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	GALNT5	Q7Z7M9	940 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	IGFN1	Q86VF2	1251 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	TICAM1	Q8IUC6	712 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	TTC39C	Q8N584	583 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	FRMD1	Q8N878	549 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	SCAI	Q8N9R8	606 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	SETD9	Q8NE22	299 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	BCAS4	Q8TDM0	211 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	C2CD4C	Q8TF44	421 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	ZFPM2	Q8WW38	1151 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	FAM120B	Q96EK7	910 aa	Known RBP	4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	KLHL15	Q96M94	604 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	CLSTN3	Q9BQT9	956 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	KAT14	Q9H8E8	782 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	TXNRD2	Q9NNW7	524 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	ANKEF1	Q9NU02	776 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	TMEM248	Q9NWD8	314 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	NCKIPSD	Q9NZQ3	722 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	UPB1	Q9UBR1	384 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	TTC3	P53804	2025 aa		4.11	□□□□□ -1.75
VPS8-223	ENST00000485024	MYOM1	P52179	1685 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024		A0A1W2PQM1	296 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	hCG_1807616	A0A1W2PRN6	198 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	LIPT2	A6NK58	231 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	MSI1	O43347	362 aa	Known RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	IL1A	P01583	271 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	GALT	P07902	379 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	FCGR2A	P12318	317 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	POR	P16435	677 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ATF7	P17544	494 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	TYK2	P29597	1187 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	KRT20	P35900	424 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	MAP2K1	Q02750	393 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	GALNT3	Q14435	633 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	KPNB1	Q14974	876 aa	Known RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	TAF11	Q15544	211 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	GFI1B	Q5VTD9	330 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	NCAPH2	Q6IBW4	605 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	C17orf99	Q6UX52	265 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ENOSF1	Q7L5Y1	443 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	MDGA2	Q7Z553	956 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	KRT77	Q7Z794	578 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	RFX6	Q8HWS3	928 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	RHPN2	Q8IUC4	686 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms