RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 ADRM1Q16186 407 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PDK4Q16654 411 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 KLHL38Q2WGJ6 581 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 EPC2Q52LR7 807 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 ABHD17BQ5VST6 288 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 NUGGCQ68CJ6 796 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 ACAD10Q6JQN1 1059 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 TATDN1Q6P1N9 297 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PGBD2Q6P3X8 592 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 RHBDF2Q6PJF5 856 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 C4orf22Q6V702 233 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 C1orf122Q6ZSJ8 110 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PDZD4Q76G19 769 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 EXOC3L1Q86VI1 746 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 MFN1Q8IWA4 741 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 RHOT1Q8IXI2 618 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 KATNAL2Q8IYT4 538 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 RCOR2Q8IZ40 523 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 RNF152Q8N8N0 203 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 FAM98AQ8NCA5 519 aaKnown RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SLC44A5Q8NCS7 719 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PPFIBP2Q8ND30 876 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 OR10H5Q8NGA6 315 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 EXD1Q8NHP7 514 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 RAB3IL1Q8TBN0 382 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 ZNF564Q8TBZ8 553 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 LRRC8CQ8TDW0 803 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PIGOQ8TEQ8 1089 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SHC3Q92529 594 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SLC9A6Q92581 669 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 NELL1Q92832 810 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 HDAC10Q969S8 669 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 RGMAQ96B86 450 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 NT5C1BQ96P26 610 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 TRAPPC9Q96Q05 1148 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 TGS1Q96RS0 853 aaKnown RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SMC6Q96SB8 1091 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 FDXACB1Q9BRP7 624 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 TMEM120AQ9BXJ8 343 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 UNKQ9C0B0 810 aaKnown RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 THAP2Q9H0W7 228 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 VCX3BQ9H321 246 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 TLE6Q9H808 572 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 TMEM8AQ9HCN3 771 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 ALG13Q9NP73 1137 aaKnown RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 RASSF1Q9NS23 344 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 TBC1D22BQ9NU19 505 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 IL1RAPL1Q9NZN1 696 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 ASIC3Q9UHC3 531 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SCOCQ9UIL1 159 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PACSIN2Q9UNF0 486 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SHOC2Q9UQ13 582 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SNX24Q9Y343 169 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 INSL6Q9Y581 213 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PCDHB2Q9Y5E7 798 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 PCDHGB2Q9Y5G2 931 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 SNX13Q9Y5W8 968 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 CDY2AQ9Y6F7 541 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 BAZ2AQ9UIF9 1905 aaKnown RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 NFASCO94856 1347 aa4.93□□□□□ -1.62
SSBP1-211ENST00000484178 ZNF335Q9H4Z2 1342 aaPredicted RBP4.93□□□□□ -1.62
SSBP1-211ENST00000484178 A0A1W2PRG0 241 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 MARCH11A6NNE9 402 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 PRR5-ARHGAP8B1AHC4 643 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 B5MCH6 92 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 F8W8V4 182 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 SMIM22K7EJ46 135 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 LEFTY2O00292 366 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 MSH4O15457 936 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 PSMD10O75832 226 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 TOMM70O94826 608 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 SLITRK3O94933 977 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 TJP3O95049 919 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 PCDH8O95206 1070 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 HKR1P10072 659 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 AKR1B1P15121 316 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 TBXAS1P24557 533 aaPredicted RBP4.92□□□□□ -1.62
SSBP1-211ENST00000484178 MGAT1P26572 445 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 KLRK1P26718 216 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 MARK3P27448 753 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 PTPN4P29074 926 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 MAPK4P31152 587 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 SHMT1P34896 483 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 JAK3P52333 1124 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 MAPK10P53779 464 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 XIAPP98170 497 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 GTF2BQ00403 316 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 KRT17Q04695 432 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 MYO1EQ12965 1108 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 PMS2P11Q13670 270 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 UBE2SQ16763 222 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 CERKLQ49MI3 558 aaPredicted RBP4.92□□□□□ -1.62
SSBP1-211ENST00000484178 CEP55Q53EZ4 464 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 ANKRD20A2Q5SQ80 823 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 LGSNQ5TDP6 509 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 THEMIS2Q5TEJ8 643 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 C6orf163Q5TEZ5 329 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 ANKRD20A1Q5TYW2 823 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 DCAF12L1Q5VU92 463 aa4.92□□□□□ -1.62
SSBP1-211ENST00000484178 ANKRD20A3Q5VUR7 823 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms