RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PIAS2O75928 621 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 LCA5LO95447 670 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 CSF2P04141 144 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 PRKCGP05129 697 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 CDK4P11802 303 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 NME1P15531 152 aaKnown RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 CCNCP24863 283 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 NFKBIAP25963 317 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 MAGEA1P43355 309 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 HNRNPKP61978 463 aaKnown RBP eCLIP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 AGERQ15109 404 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 IRF4Q15306 451 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 SPA17Q15506 151 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 RHOT1Q8IXI2 618 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 CCDC170Q8IYT3 715 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 SLC25A45Q8N413 288 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 TEX26Q8N6G2 289 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 PQLC3Q8N755 202 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 TSGA13Q96PP4 275 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 RNF157Q96PX1 679 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 PANX2Q96RD6 677 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 POLR1EQ9GZS1 481 aaKnown RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 NOD2Q9HC29 1040 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 LUC7LQ9NQ29 371 aaKnown RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 UCKL1Q9NWZ5 548 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 AMACRQ9UHK6 382 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 PCDHGC4Q9Y5F7 938 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 TTC24A2A3L6 582 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 C1QTNF9BB2RNN3 333 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 TRIM38O00635 465 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 MATN3O15232 486 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 FFAR2O15552 330 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 SPOPO43791 374 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 MAP3K6O95382 1288 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 CPP00450 1065 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 KRT1P04264 644 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 C1SP09871 688 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ELFN1P0C7U0 828 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 C1QTNF9P0C862 333 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ALPPL2P10696 532 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 CKMT2P17540 419 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 CYLC1P35663 651 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ACADVLP49748 655 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 HADHBP55084 474 aaKnown RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 MAXP61244 160 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 SEMG2Q02383 582 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 GBE1Q04446 702 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ITKQ08881 620 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 RALGDSQ12967 914 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ZNF211Q13398 564 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 WSCD2Q2TBF2 565 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 CCDC157Q569K6 752 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ODF2Q5BJF6 829 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ZNF542PQ5EBM4 170 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 TPRG1LQ5T0D9 272 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 MACC1Q6ZN28 852 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 DPPA4Q7L190 304 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 ZNF548Q8NEK5 533 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 OR4C6Q8NH72 309 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 PDCD6IPQ8WUM4 868 aaKnown RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 BTN2A2Q8WVV5 523 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 MAML1Q92585 1016 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 GATA6Q92908 595 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 HDAC11Q96DB2 347 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 NSMCE3Q96MG7 304 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 MAK16Q9BXY0 300 aaKnown RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 NT5MQ9NPB1 228 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 DDX56Q9NY93 547 aaKnown RBP11.95□□□□□ -0.5
HMGN1-213ENST00000482192 NLGN3Q9NZ94 848 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 COQ6Q9Y2Z9 468 aa11.95□□□□□ -0.5
HMGN1-213ENST00000482192 TMEM8BA6NDV4 472 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 C3orf70A6NLC5 250 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-213ENST00000482192 APOL1O14791 398 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 SCAMP1O15126 338 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 SIGLEC6O43699 453 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 RFPL3O75679 317 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 NEBLO76041 1014 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 PGLSO95336 258 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
HMGN1-213ENST00000482192 PROS1P07225 676 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 CCNB1P14635 433 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 JUNDP17535 347 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 COMTP21964 271 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 CES1P23141 567 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 HTR1BP28222 390 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 NOP2P46087 812 aaKnown RBP11.94□□□□□ -0.5
HMGN1-213ENST00000482192 PEX5P50542 639 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 TRAF2Q12933 501 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 EIF2B5Q13144 721 aaKnown RBP11.94□□□□□ -0.5
HMGN1-213ENST00000482192 DNAJC3Q13217 504 aa11.94□□□□□ -0.5
HMGN1-213ENST00000482192 ILKQ13418 452 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms