RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 RAC2P15153 192 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 GRK2P25098 689 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PSMB4P28070 264 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SERPINB6P35237 376 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SPRP35270 261 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ADRA1BP35368 520 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PGM1P36871 562 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 VHLP40337 213 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 GRIA1P42261 906 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MAGEA12P43365 314 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 LHX1P48742 406 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NPY2RP49146 381 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SERPINB8P50452 374 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CDK7P50613 346 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 RAP1GDS1P52306 607 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CSE1LP55060 971 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 AQP5P55064 265 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SESN2P58004 480 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 DAOAP59103 153 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 TPI1P60174 286 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 COG7P83436 770 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PPIDQ08752 370 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SEMA3BQ13214 749 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NAA25Q14CX7 972 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CCDC6Q16204 474 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ARL13BQ3SXY8 428 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CCDC153Q494R4 210 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 FASTKD1Q53R41 847 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MDH1BQ5I0G3 518 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF618Q5T7W0 954 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 N4BP2L1Q5TBK1 243 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MBLAC2Q68D91 279 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 BNC2Q6ZN30 1099 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 AGMOQ6ZNB7 445 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 RINLQ6ZS11 566 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CLEC20AQ6ZU45 233 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 RFX8Q6ZV50 586 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 TLK2Q86UE8 772 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 RASSF3Q86WH2 238 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 LMNTD2Q8IXW0 634 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF567Q8N184 647 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PYROXD2Q8N2H3 581 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 GPATCH11Q8N954 259 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CCNYQ8ND76 341 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 FBXO27Q8NI29 283 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 TTC8Q8TAM2 541 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PIWIL2Q8TC59 973 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PPP4R1Q8TF05 950 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ARNTL2Q8WYA1 636 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 IRGQQ8WZA9 623 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 STMN2Q93045 179 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PGBD4Q96DM1 585 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PGAP3Q96FM1 320 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CERS2Q96G23 380 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NAF1Q96HR8 494 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF570Q96NI8 536 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 DEFB118Q96PH6 123 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PPP1R10Q96QC0 940 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 VAT1Q99536 393 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 LGMNQ99538 433 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MECRQ9BV79 373 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ULBP1Q9BZM6 244 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NMUR2Q9GZQ4 415 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 AP5M1Q9H0R1 490 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PRDM12Q9H4Q4 367 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PARD6AQ9NPB6 346 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CASS4Q9NQ75 786 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CNGB3Q9NQW8 809 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SYBUQ9NX95 663 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NSMCE4AQ9NXX6 385 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 TAS2R1Q9NYW7 299 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 BFARQ9NZS9 450 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SEPT10Q9P0V9 454 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 KLHL8Q9P2G9 620 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SRRDQ9UH36 339 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 TRHDEQ9UKU6 1024 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PPT2Q9UMR5 302 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 Q9Y3F1 56 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MFHAS1Q9Y4C4 1052 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PCDHB5Q9Y5E4 795 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NUMBLQ9Y6R0 609 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 EYSQ5T1H1 3165 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PLXNA3P51805 1871 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 NYNRINQ9P2P1 1898 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 FRMPD3Q5JV73 1810 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 GPR179Q6PRD1 2367 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF318Q5VUA4 2279 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 B2RBV5 119 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TMEM114B3SHH9 223 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 M0QZ92 97 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 CLDN5O00501 218 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 PTGESO14684 152 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 NVLO15381 856 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 KLF4O43474 513 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TIMM44O43615 452 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 KIF1CO43896 1103 aaKnown RBP5.01□□□□□ -1.61
SF3B6-202ENST00000478050 KPNA6O60684 536 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 TM7SF2O76062 418 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms