RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 VPS41P49754 854 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 MRPS25P82663 173 aaKnown RBP11.55□□□□□ -0.56
CBWD3-206ENST00000478048 ZBTB16Q05516 673 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 OLIG2Q13516 323 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 GRM3Q14832 879 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 PCSK7Q16549 785 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 SYCP2LQ5T4T6 812 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 PIP5KL1Q5T9C9 394 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 ITPRIPL1Q6GPH6 555 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 KDELC1Q6UW63 502 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.55□□□□□ -0.56
CBWD3-206ENST00000478048 GANCQ8TET4 914 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 ZNF641Q96N77 438 aaPredicted RBP11.55□□□□□ -0.56
CBWD3-206ENST00000478048 SMIM14Q96QK8 99 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 KRT12Q99456 494 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 OMDQ99983 421 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 TDRD1Q9BXT4 1180 aaKnown RBP11.55□□□□□ -0.56
CBWD3-206ENST00000478048 NEU2Q9Y3R4 380 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 PCDHB9Q9Y5E1 797 aa11.55□□□□□ -0.56
CBWD3-206ENST00000478048 IGHV1OR15-9A0A0B4J2B8 117 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 TSPAN11A1L157 253 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 CCDC188H7C350 402 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 SOCS5O75159 536 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-206ENST00000478048 TIMP2P16035 220 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 ACSL1P33121 698 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 ABL2P42684 1182 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 TAS2R38P59533 333 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 INSM1Q01101 510 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-206ENST00000478048 SEMG2Q02383 582 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
CBWD3-206ENST00000478048 PTPRRQ15256 657 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 PARP6Q2NL67 630 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 MAP7D1Q3KQU3 841 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 TTC31Q49AM3 519 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-206ENST00000478048 AGBL4Q5VU57 503 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 ERN2Q76MJ5 926 aaKnown RBP11.54□□□□□ -0.56
CBWD3-206ENST00000478048 ZNF572Q7Z3I7 529 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-206ENST00000478048 TTC7BQ86TV6 843 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 WDR5BQ86VZ2 330 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 NELL1Q92832 810 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 PPP1R16AQ96I34 528 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 HDAC8Q9BY41 377 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 ETNK1Q9HBU6 452 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 DYRK4Q9NR20 520 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 PCYOX1Q9UHG3 505 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 FAM153AQ9UHL3 310 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 SCML1Q9UN30 329 aa11.54□□□□□ -0.56
CBWD3-206ENST00000478048 CCDC163A0A0D9SF12 145 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 TERTO14746 1132 aaKnown RBP11.53□□□□□ -0.56
CBWD3-206ENST00000478048 SPINT1O43278 529 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 PGLSO95336 258 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 IGLV3-19P01714 112 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 KRT14P02533 472 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 ADRB3P13945 408 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 ACTN2P35609 894 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 NEK3P51956 506 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 TERF1P54274 439 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 WNT3AP56704 352 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 LMNB2Q03252 620 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 CKAP4Q07065 602 aaKnown RBP11.53□□□□□ -0.56
CBWD3-206ENST00000478048 UGP2Q16851 508 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
CBWD3-206ENST00000478048 ARMC12Q5T9G4 340 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 FBXL19Q6PCT2 694 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 USP30Q70CQ3 517 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 LONP2Q86WA8 852 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 PAF1Q8N7H5 531 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 IPMKQ8NFU5 416 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 PIH1D2Q8WWB5 315 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 FAM131CQ96AQ9 280 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 PCDH9Q9HC56 1237 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 PAK5Q9P286 719 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 DKK3Q9UBP4 350 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 MBD1Q9UIS9 605 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-206ENST00000478048 GGT7Q9UJ14 662 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 ITM2BQ9Y287 266 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 MUC6Q6W4X9 2439 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 PLXND1Q9Y4D7 1925 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 SPAG17Q6Q759 2223 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 TRPM6Q9BX84 2022 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 MYO15AQ9UKN7 3530 aa11.53□□□□□ -0.56
CBWD3-206ENST00000478048 A0A0U1RQS6 177 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 H0Y858 1186 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 TTI1O43156 1089 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 ZNF217O75362 1048 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 ECEL1O95672 775 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 BCKDHBP21953 392 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 CHRNA4P43681 627 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 ADPRHP54922 357 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 GEMP55040 296 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 MPP3Q13368 585 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 TUBB2AQ13885 445 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 GALNT3Q14435 633 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 SPARCL1Q14515 664 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 ZNF528Q3MIS6 628 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 CFAP58Q5T655 872 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 KCTD11Q693B1 232 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms